Results

Progress Reports: 2002–2020
… pdfs of previous Progress Reports from the Joint Genome Institute.  … FY20 Progress Report … FY19 Progress … Report … FY16 Progress Report … FY15 Progress Report … FY14 Progress Report … FY13 Progress Report … FY12 Progress …
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Hiroshi Otani
Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been studying … S, Otani H, Udwary DW, Doering DT, Mouncey NJ. Cytochromes P450 involved in bacterial RiPP biosyntheses. J Ind Microbiol … product galaxy. J Ind Microbiol Biotechnol. 2019 Mar;46(3-4):273-279.   Otani, H., Stogios, P.J, Xu, X., Nocek, …
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Exploring Polymorphisms Created by Transposable Elements
My project at the Joint Genome Institute (JGI) was to measure the polymorphisms that …
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Complete genome sequence of the thermophilic, hydrogen-oxidizing Bacillus tusciae type strain (T2T) and reclassification in the new genus, Kyrpidia gen. nov. as Kyrpidia tusciae comb. nov. and emendation of the family Alicyclobacillaceae da Costa and
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Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305T), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended
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Streamlining Regulon Identification in Bacteria
… in Streptomyces coelicolor . The Impact As an integrative genome science user facility, connecting genes to functions … of the mission of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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New Research Sheds Light on Diversity in the Deep Sea
… and the University of Wisconsin-Madison collected 40 samples from five oceanic regions to better understand … Scientists with the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … contributed metagenomic sequencing to the study as well as  genome analysis, providing authors a more complete picture …
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Genome sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica DSM16522, Xenorhabdus koppenhoeferii DSM18168, and Xenorhabdus mauleonii DSM17908
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I-Min (Amy) Chen
… data management infrastructure of the Integrated Microbial Genomes (IMG) family of systems. Before joining LBNL in … A, Chu K, Ritter SJ, Reddy TBK, Mukherjee S et al. IMG/VR v4: an expanded database of uncultured virus genomes within a framework of extensive functional, …
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Partnering with CalTeach – Training the Next Generation STEM Workforce
Basepairs, A Vision for Integrative and  Collaborative Genome Science” – through early introduction to the …
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2025 NeLLi Symposium
… and Agenda Coming Soon!  Hosted by the DOE Joint Genome Institute, the University of Nevada, Las Vegas, and … cultivating new Bacteria and Archaea revealed by a recent genome census . Speakers John M. Archibald (Keynote) … to space restraints. Poster Sizes: The poster boards are 4’x8′. Please be mindful in bringing posters that are at …
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Trent Northen
Northen’s research is focused on using metabolomics to link genomes with environments to understand how webs of microbes … Science Program Head at the JGI. Click to learn more about the program's areas of focus, major initiatives and … starvation modulate root exudation. Science Advances, 2024 10(1), Schadt, C., Martin, S., Carrell, A. et al. An …
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