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IMG/VR
… JGI's Simon Roux describes the structure and content of the IMG/VR v3 … the latest release of IMG database dedicated to viral genomes assembled from metagenomes. He also demonstrates briefly how to leverage novel …
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The Mobilome in the Mire
…   For years, researchers have known that many datasets miss a key part of microbial genomes: the mobile genetic elements, or MGEs, that can move … bringing this mobilome into light, and opening up new options for engineering these microbes in the future. Join Sarah …
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JGI Earth Month: Kjiersten Fagnan Reflects on Shelter-in-Place Effects
… In   April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25.  On March 17, 2020, a shelter-in-place order … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility … DOE’s Office of Science is the largest supporter of basic research in the physical sciences in the United States, and …
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Mindfully Moving JGI
… JGI is in the process of shifting its operations from Walnut Creek to the heart of the Berkeley Lab campus. By Friday, October 18, the production sequencing labs in Building 100 were silent. Twenty years … after the JGI united the genomics expertise of three national labs in one long building at Walnut Creek, after …
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Promoting the Power of Viral Metagenomics
… the field of viral metagenomics, authored by JGI researchers Lee Call,  Stephen Nayfach and  Nikos Kyrpides , … early 2020, people all over the world have been forced to confront the awesome power that viruses have to affect nearly every aspect of our daily lives.  But for researchers who study viruses that infect organisms much …
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Styling for Safety: PPE, It’s the JGI Way
… PPE or Personal Protective Equipment is worn to minimize exposure to … can cause workplace injuries and illnesses.  PPE or Personal Protective Equipment is worn to minimize exposure to … illnesses. These injuries and illnesses may result from contact with chemical, biological, physical, mechanical, or …
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An Earth Month Look at Sustainability Efforts at the JGI
… Sustainable Berkeley Lab maintains a  calendar of Earth Month events throughout April. This year, a new group at the … Plant Sale. All year, the JGI helps support finding solutions to clean energy and environmental challenges. And many JGIers work to connect those …
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DOE JGI Interns Share Their Summer Experiences
… the field, work at the lab bench, and also do some computational analyses at their desks. As part of the DOE JGI’s … Zhong Wang while Karen Tolentino worked with Brachypodium researcher John Vogel. Other students hosted this summer were: Rida Ali, who worked with T.B.K. Reddy on the Genomes OnLine Database; Sarah Fruchart , who worked with …
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