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JGI is in the process of shifting its operations from Walnut Creek to the heart of … after countless generations of sequencing platforms (up to 120 sequencing machines at maximum) maintained by a workforce … cleanup.lbl.gov .     … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… (CSMB) at Oak Ridge National Laboratory.   On March 2, 2021, the Environmental Molecular Sciences Laboratory hosted a … on “Integrated Multi-omics Analyses for the Prediction of Metabolic Flux in. Lignin Conversion”       … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

Krishna is responsible for the design and maintenance of the Integrated Microbial Genomes (IMG) data warehouse, and integration of genomic and metagenomic data with transcriptomics and …

Marcel is in charge of several production pipelines (gene calling, functional … annotation and methylomics) that run on microbial genomes and metagenomes. He also works on automating intra-department data …

Learn more about MycoCosm, a data portal with over 2,000 fungal genomes and multi-omics datasets, equipped with interactive …

A quick snippet on Antonio Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses spread …

… food, medicine, and bioenergy crops. But most available genomes are from narrow swaths of the plant tree of life. One project aims to change that. …

… the DOE JGI hosted 10 interns who came from a wide range of backgrounds. Many of them spent the summer crunching genomic data at a … summer were: Rida Ali, who worked with T.B.K. Reddy on the Genomes OnLine Database; Sarah Fruchart , who worked with …

… group. His research interests lie in use and development of bioinformatics tools for elucidation of biosynthetic gene … metabolism. … PhD in Chemistry, Johns Hopkins University (2003) MS in Chemistry, Johns Hopkins University (2000) BS in … (1996) … List available on Google Scholar … Education … Publications …

… closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was appointed CIO of the JGI in … Computing Conference . … UC CORO participant, 2021 Member of the Networking and Information Technology … … About the JGI Chief Informatics Officer … Selected Publications … Awards and Honors …