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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… at their base are microscopic, photosynthetic algae. But human-induced climate change , a new study suggests, is … research cruises, they dipped their self-closing containers into sea water to sample algal communities along transects … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
… academia. And so this was the first time I was introduced into what a government lab and what this future could look … bit stronger in computing, so I was kind of worried coming into the, the internship that maybe I didn’t have as good of … And I’m excited to take that with me, along with other tools that I can use to, um, perform computational biology.  …
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Effects of Polar Light Cycle on Microbial Food Web
A long-running time-series study offers a first glimpse into a full season’s cycle of this polar environment. This … collected over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published in  … researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… enabled by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Euryarchaeota .  Finding Methane-Making Microbes with Metagenomics  By leveraging metagenomics to sample the entirety … the JGI because with that, we have a much less biased view into biological diversity. You don’t have tunnel vision …
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Progress Reports: 2002–2020
… pdfs of previous Progress Reports from the Joint Genome Institute.  … FY20 Progress Report … FY19 Progress …
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Exploring Polymorphisms Created by Transposable Elements
My project at the Joint Genome Institute (JGI) was to measure the polymorphisms that …
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Fungus Fuels Tree Growth
… partnered with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Program in order to get  M. elongata and  I. europaea  genomes sequenced and annotated for this study. The team … team also observed that the plants instead put more energy into growth, noting they increased expression of genes …
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Toward More Efficient Artificial Photosynthesis
… including sunlight, carbon and water, to convert them into energy that is then stored. A team led by researchers … Program (CSP) of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Lab). Supporting the Erb lab through the CSP Functional Genomics call, the JGI synthesized library of genes that …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who was … Society for Microbiology (ASM). Roux leads the Viral Genomics group within the JGI Metagenome Program, and … Roux is also one of the lead organizers of the Viral EcoGenomics & Applications (VEGA) Symposium , which will take …
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The Big Deal About Short Plants
… plant genetic sequences to what they do. But sequencing the genome of one short plant — fire moss — had an unexpected …
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Partnering with CalTeach – Training the Next Generation STEM Workforce
Basepairs, A Vision for Integrative and  Collaborative Genome Science” – through early introduction to the …
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Matthew Kellom
… between microbial life and environment, and using metagenomics to study these complex natural systems. Microbial … places that are considered to be inhospitable to humans are of particular interest. Matt also supports various CSP and FICUS user projects for the Metagenome Program. …
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