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JGI is in the process of shifting its operations from Walnut Creek to the heart of … next two weeks, they were crated, shipped to, and then installed at the  Integrative Genomics Building , JGI’s … cleanup.lbl.gov .     … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… (CSP) . This includes mass spectrometry-based measurements of primary and secondary metabolites from plants, … Program , along with Jenny Mortimer, Director of Plant Systems Biology at the Joint BioEnergy Institute (JBEI). … (uM etc).  … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

Krishna is responsible for the design and maintenance of the Integrated Microbial Genomes (IMG) data warehouse, and integration of genomic and metagenomic data with transcriptomics and …

Marcel is in charge of several production pipelines (gene calling, functional … annotation and methylomics) that run on microbial genomes and metagenomes. He also works on automating intra-department data exchange and assists with large scale computations on R&D projects. …

… more about MycoCosm, a data portal with over 2,000 fungal genomes and multi-omics datasets, equipped with interactive … and community annotation. Presented by Igor Grigoriev, Steven Mondo, Steven Ahrendt and Sajeet Haridas. …

A quick snippet on Antonio Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses spread …

What if we understood plants and how they adapt to their ever-changing … food, medicine, and bioenergy crops. But most available genomes are from narrow swaths of the plant tree of life. One project aims to change that. …

This summer, the DOE JGI hosted 10 interns who came from a wide range of backgrounds. Many of them spent the summer crunching … summer were: Rida Ali, who worked with T.B.K. Reddy on the Genomes OnLine Database; Sarah Fruchart , who worked with …

Dr. Udwary serves as a computational biologist for JGI’s Secondary Metabolites group. His research interests lie in use and development of bioinformatics tools for elucidation of biosynthetic gene … (1996) … List available on Google Scholar … Education … Publications …

… efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass … offered by the platform are a result of Dr. Louie’s establishment of a strong core foundation of robust mass … Sci Rep. 2013;3: 1656. … Education … Selected Publications …

Kjiersten Fagnan began working with JGI in 2012 as a NERSC … closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was appointed CIO of the JGI in … … About the JGI Chief Informatics Officer … Selected Publications … Awards and Honors …