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JGI Hosts GPU Hackathon in May
… high-performance computing resources, an upcoming hackathon led by the Oak Ridge Leadership Computing Facility … (OLCF), NVIDIA, and the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, aims to explore applications in the life sciences that can be ported to the GPU …
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Gene Expression: From On-Off Switch to Dial
… Fine-tuning metabolic gene expression helps identify variants in yeast genes. The Science … a more nuanced library approach to tuning gene expression in metabolic pathways. Compared to the traditional way, … researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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iPHoP: A Matchmaker for Phages and their Hosts
…   To understand virus-host dynamics, computation helps fill in what cultivation can’t. The Science At first, viruses are merely toolkits. … led by scientists at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … The work conducted by the U.S. Department of Energy Joint Genome Institute (https://ror.org/04xm1d337), a DOE Office …
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Katherine Louie
… became Platform Lead where she manages metabolomics production for community sequencing projects and heads R&D efforts to expand the metabolomics … rich metabolite profiles from diverse biological and environmental samples in support of user science.  Capabilities …
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Toward More Efficient Artificial Photosynthesis
… Chloroplast mimic a platform to capture and utilize carbon in a synthetic fixation cycle. The Science Chloroplasts are the factories in … Program (CSP) of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … ‘SYBORG’), as well as the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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JGI@25: Stories from Intern Alumni
… 2022 marks the JGI’s 25th anniversary . Over the next few months, we’ll be revisiting a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help … wet lab experiments, to computational modeling and virtual projects, hear intern alumni Candace Cole, Alessandro …
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Mindfully Moving JGI
… JGI is in the process of shifting its operations from Walnut Creek to the heart of the Berkeley Lab campus. By Friday, October 18, the production sequencing labs in Building 100 were silent. Twenty years … after the JGI united the genomics expertise of three national labs in one long building at Walnut Creek, after …
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Honey Bee Gut Microbiota Divvy Up Dinner
… Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex … including collecting and analyzing the honey bee gut metagenome, which was done with the help of the US Department of Energy Joint Genome Institute.     … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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When “The Blob” Made It Hotter Under the Water
… marine heatwave event may foreshadow climate change impact on marine microbial communities. The Science A team of … ocean known as “The Blob.” The event was recorded during a long-term study of microbial communities in the northeastern … were sequenced by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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JGI-KBase Panel at SACNAS
… Nov. 2: Getting Credit for Scientific Contributions of Any Size What is considered to be a scientific … program managers, and intern alumni will introduce projects designed for students to gain research experience …
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Three Join the JGI User Executive Committee
… (UEC) recently welcomed three new members earlier this month – Sneha Couvilion of Pacific Northwest National … in crops. He has been a PI or Co-PI on five user projects with the JGI, as well as served on review panels … a PI for both CSP New Investigator and large-scale CSP projects. Wilbanks has served on review panels for the JGI’s …
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JGI Pitches 2022 Visiting Faculty Program Collaborations
…   On November 3, 2021, the JGI and the Workforce Development & … for the summer term (May through August) and selected projects will receive stipend and travel expenses, both for … were: Simon Roux and Matthew Kellom for the JGI Metagenome Program Ellen Dow and Elisha Wood-Charlson for the …
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