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Extracting Protein-Protein Interactions (PPIs) from Biomedical Literature using Attention-based Relational Context Information
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Multiplex Editing of the Nucleoredoxin1 Tandem Array in Poplar: From Small Indels to Translocations and Complex Inversions
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Phenotypic and omics analyses of the Sordariomycetes Marquandomyces marquandii and Albophoma yamanashiensis isolated from estuarine sediments
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Green genes from blue greens: challenges and solutions to unlocking the potential of cyanobacteria in drug discovery
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Exploring the Structural, Biochemical, and Functional Diversity of Glycoside Hydrolase Family 12 from Penicillium subrubescens
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Architecture, catalysis and regulation of methylthio-alkane reductase for bacterial sulfur acquisition from volatile organic compounds
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Accelerating Metagenomics Discoveries with Deep Learning
… On July 6, scientists from Lawrence Berkeley National … biologist at the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating vector … to vectorize protein sequences. Sevim is part of the JGI Genome R&D Group and is one of more than 100 scientists and …
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JGI Early Career Researchers Featured in mSystems Special Issue
… issue of mSystems , out May 14, 2019, JGI researchers are among the authors who offer perspectives on what the next five … Micro-Scale Applications head Rex Malmstrom and Metagenome Program head Emiley Eloe-Fadrosh outline more … processes. A third approach steps away from reconstructing genomes directly from the environment and focuses on …
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Mapping Heat Resistance in Yeasts
… A new approach for improving functional annotation in fungal genomes. The Science In a … as the 1000 Fungal Genomics Project led by the DOE Joint Genome Institute (JGI), a DOE Office of Science User … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… Over 40 percent of the cereal crop’s genes respond to drought stress. The Science Fields of drooping stalks … Laboratory, and the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User … usable for conventional food crops. For that reason, its genome was sequenced by the JGI in 2009 and it is considered …
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Hiroshi Otani
… Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in microbes, particularly actinomycetes. His research activity is focused on developing and implementing new technologies and … H, Mouncey NJ. RIViT-seq enables systematic identification of regulons of transcriptional machineries. Nat Commun. …
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JGI-UC Merced Interns Share Their 2021 Experiences
… JGI mentors to investigate rigorous research projects, hone science presentation skills, and participate in professional development enrichment activities. For some students in … Evolution of the Mitochondria Internship … Cross Species Integration of Single Cell Transcriptomes …
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