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Busting the Unbreakable Lignin
… components   The Science There are three main ingredients to tackle when it comes to breaking down a plant for energy: … with researchers at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … RNA sequencing and alignment to the reference fungal  genome . The study’s pivotal NMR (nuclear magnetic …
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Training the Next Generation of Talent
… his summer research at the U.S. Department of Energy Joint Genome Institute (DOE JGI), a DOE Office of Science user … was back on campus at the University of California, Merced to start orientation as a first-year graduate student in the … DOE JGI that provide hands-on experience in cutting-edge genome research and apply experimental and computation tools …
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JGI on the 2021 Highly Cited Researchers List
Congratulations to the 2021 Highly Cited Researchers at the JGI! They are … team that combined field data with a reference switchgrass genome to associate climate adaptations with switchgrass … of webinars featuring aspects of the Integrated Microbial Genomes & Microbiomes (IMG/M) Nikos Kyrpides was part of an …
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IMA genome-F18
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JGI Announces 2023 Community Science Program Awardees
Congratulations to the proposers of the 19 proposals selected for the 2023 … Program call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). “We’re very excited to start working …
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Virus-Microbe Interactions of Mud Island Mangroves
… program , which awards graduate students the opportunity to pursue part of their thesis research at one of the DOE national laboratories or national user facilities. Baker had worked with … research builds on that. “The purpose of this CSP is to better understand methane cycling in mangrove wetlands in …
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Rex Malmstrom
… bacterial group in the ocean. Later during his postdoctoral work at the Massachusetts Institute of Technology he … genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His group also handles the … PNAS 113 (28), E4069-E4078 Bendall, M.L. et al. 2016. Genome-wide selective sweeps and gene-specific sweeps in …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
Congratulations to the 2023 Highly Cited Researchers from the JGI recognized … were all instrumental in the development of the Novel Metagenome Protein Families (NMPF) Catalog . Published in the … elements based upon their gene content and their genetic sequences. Roux was first author on a study featuring a new …
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JGI Hosts GPU Hackathon in May
… (OLCF), NVIDIA, and the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, aims to explore applications in the life sciences that can be ported to the GPU architecture. A GPU hackathon is a five-day …
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Gene Expression: From On-Off Switch to Dial
Scientists have developed a more nuanced library approach to tuning gene expression in metabolic pathways. Compared to … researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
For many scientists, the culmination of their work into a written report that is published in a scientific … determination. Rhondene Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship program and … applications, Wint also developed and tested a gene sequence-based predictor of gene expression levels using …
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JGI at the AGU Fall Meeting
… unless otherwise noted): December 7   9:15am PT (online) Town Hall on the role of user facilities in accelerating … Successful Proposals December 9  4:15pm PT (online) Town Hall on how the Facilities Integrating Collaborations … context for thousands of newly sampled microbial genomes from North American watersheds (Invited)” 4pm CST …
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