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JGI at the AGU Fall Meeting
Register for the meeting here. Here are some sessions of interest (all times in PST unless otherwise noted): … context for thousands of newly sampled microbial genomes from North American watersheds (Invited)” 4pm CST … 1000 Soils Project: core collection strategy and data types available” December 17  6:40am Convention Center Rm …
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Year in Review: JGI’s 2018 Progress Report Available Now
The latest edition of the JGI Progress Report highlights notable research and … scientific collaborations in 2018. The cover is an image of Mono Lake, a saline soda lake east of California’s … own Jon Bertsch. Microbes isolated from Mono Lake were sequenced by the JGI (isolates here , here and here ), and …
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Toward More Efficient Artificial Photosynthesis
… (MPI) for Terrestrial Microbiology and the University of Bordeaux have developed a platform that mimics … Program (CSP) of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Office of Science User Facility (contract no. DE-AC02-05CH11231) with T.J.E. as grantee. J.-C.B. acknowledges the …
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JGI Earth Month: Kjiersten Fagnan Reflects on Shelter-in-Place Effects
In   April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25.  On March … at Lawrence Berkeley National Laboratory, is located in one of those counties. The shelter-in-place order has since been … order.     … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both … stressors, um, alter microbial biomass and then what the consequences are for the ecosystem. ALISON:  So, Ed is trying … See you next time. … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Mindfully Moving JGI
JGI is in the process of shifting its operations from Walnut Creek to the heart of … after countless generations of sequencing platforms (up to 120 sequencing machines at maximum) maintained by a … cleanup.lbl.gov .     … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Alabama A&M Interns Access An Abundance of Knowledge
In 2024, the DOE Joint Genome Institute and Alabama A&M University piloted an … mentors Yi Zhai and John Vogel on researching the effects of Brachypodium distachyon plant root exudates on the plant … it’s something that’s similar to what you’re working on or completely different, if you have curiosity, all you have to …
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Forming Scientific Connections and Building Community
The 11th cohort of JGI-UC Merced interns pick highlights from their summer … This year the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Mentors: Jessen Bredeson & Albert Wu Project: “ Pangenome de Bruijn Graph Simplification ” Peter Nguyen : …
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Viruses Reprogram Cells into Different Virocells
… from The Ohio State University and the University of Michigan studying how virus infections cause significant … between the  U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Research and operated under Contract Numbers DE-AC02–05CH11231 (JGI) and DE-AC05–76RL01830 (EMSL). This work was …
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Krishna Palaniappan
Krishna is responsible for the design and maintenance of the Integrated Microbial Genomes (IMG) data warehouse, and integration of genomic and metagenomic data with transcriptomics and …
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Marcel Huntemann
Marcel is in charge of several production pipelines (gene calling, functional … annotation and methylomics) that run on microbial genomes and metagenomes. He also works on automating intra-department data …
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MycoCosm Tutorial
… more about MycoCosm, a data portal with over 2,000 fungal genomes and multi-omics datasets, equipped with interactive …
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