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Dispatches From JGI Interns
… and graduate students to engage in real, impactful research projects with JGI mentors. In this episode, hear two interns from the 2021 cohort describe their deep dives into genomics, computational tools, and big data.  …
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Microbiome Data Science Team
… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … a major transition of biology into data science.  Research in the Kyrpides group focuses on Microbiome Data … al. (2017) Protein structure determination using metagenome sequence data. Science   355(6322):294-298 Paez-Espino D. et …
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Pinning Down a Piece of Photosynthesis
By studying the structure and function of a cyanobacterial protein, researchers have new insights into how these ocean … of that machine — photosynthesizers’ DNA and RNA. These sequences provide a list of machine parts, and an idea of …
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JGI-USCCN Strain Sequencing Opportunity
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Polar Phytoplankton Need Zinc to Cope with the Cold
Antarctic algae need their vitamins; zinc fuels some of their most important functions. Even in the chilly waters … looking at how communities of these microalgae interact, researchers have found that polar algae rely on dissolved zinc … collaboration, in 2017, they published the first genome sequence of a cold-adapted microalga: the diatom …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… — making it difficult to grasp a deeper understanding of fundamental aspects of fern biology and, more broadly, … power of plants, and the lessons they can teach us, are why the U.S. Department of Energy (DOE) Joint Genome … richardii marks the first published manuscript of a genome sequence generated through the OGG. For a long time, C-fern …
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Short sequence motifs, overrepresented in mammalian conserved non-coding sequences
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When “The Blob” Made It Hotter Under the Water
… impact on marine microbial communities. The Science A team of researchers tracked the impact of a large-scale heatwave … that takes carbon from the atmosphere and keeps it in the deep ocean. With genomic samples collected before, during … samples. Genomic DNA extracted from the water samples were sequenced by the U.S. Department of Energy (DOE) Joint …
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Effects of Polar Light Cycle on Microbial Food Web
Populations of Antarctic lake microbial communities change with the seasons. The Science Light-harvesting bacteria (phototrophs) … the natural world. The Impact From the polar regions to the deep ocean, cold environments occupy more space on Earth …
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JGIota: Sequencing Shiitakes with David Hibbett
David Hibbett of Clark University fills us in on the kind of decay that makes shiitake mushrooms special. This week, …
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Targeted single‐cell sequencing
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Introduction: Sequences and consequences
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