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Seasonal Succession Leads to Habitat-Dependent Differentiation in Ribosomal RNA:DNA Ratios among Freshwater Lake Bacteria
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A Novel Freshwater to Marine Evolutionary Transition Revealed within Methylophilaceae Bacteria from the Arctic Ocean
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Time‐series metatranscriptomes reveal conserved patterns between phototrophic and heterotrophic microbes in diverse freshwater systems
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Differential effects of press vs. pulse seawater intrusion on microbial communities of a tidal freshwater marsh
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Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications
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Micro-Scale Applications Group
… that utilize microfluidics/microdroplet technology in order to enhance the quality of single-cell genomes and directly … access to cutting-edge cell sorting, DNA amplification, and sequence analysis to recover the genomes of uncultivated … now uses laser microdissection to selectively isolate and sequence microbial aggregates after first imaging with …
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Nigel Mouncey
… the DOE Joint Genome Institute in 2017 as the fourth Director in its 27-year history. He has a wealth of managerial … position JGI as a leading integrative genome science user facility. In addition to serving as JGI Director, Dr. Mouncey … R. L. et al. 2022. Expanding the Genomic Encyclopedia of Actinobacteria with 824 Isolate Reference Genomes. Cell …
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Dominant nitrogen metabolisms of a warm, seasonally anoxic freshwater ecosystem revealed using genome resolved metatranscriptomics
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Overview of the Genomes OnLine Database (GOLD)
… gives an overview of the JGI's Genomes OnLine Database and why curated metadata matters. …
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Microbiome Data Science Team
… discoveries and catalyzing a major transition of biology into data science.  Research in the Kyrpides group focuses on … al. (2017) Protein structure determination using metagenome sequence data. Science   355(6322):294-298 Paez-Espino D. et … and uncultured DNA Viruses and retroviruses.  Nucleic Acids Res.  45(D1):D457-D465. Paez-Espino, D. et al. (2016) …
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Effects of Polar Light Cycle on Microbial Food Web
… with the seasons. The Science Light-harvesting bacteria (phototrophs) in Antarctica’s Ace Lake defy the norm when it … Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory … is covered in thick ice, with a combination of marine and freshwater below. This stratified mixture holds oxygenated …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
A nuanced understanding of peat moss drives insight into carbon storage   The Science Boggy peatlands, which hold … the ground cover in peatlands. These boggy ecosystems are acidic and have very little oxygen, which is tough on the … Laboratory, and the HudsonAlpha Institute for Biotechnology sequenced sphagnum  genomes from plants selected by a team …
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