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Genomic analysis of three Bifidobacterium species isolated from the calf gastrointestinal tract
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Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species
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Transcriptomic Analysis of the CAM Species Kalanchoë fedtschenkoi Under Low- and High-Temperature Regimes
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The core metabolome and root exudation dynamics of three phylogenetically distinct plant species
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Ecological divergence of syntopic marine bacterial species is shaped by gene content and expression
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Genetic architecture of floral traits in bee‐ and hummingbird‐pollinated sister species of Aquilegia (columbine)
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Metaproteomics method to determine carbon sources and assimilation pathways of species in microbial communities
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Computationally Classifying Fungal Lifestyles
Machine learning methods were applied on sequenced fungal genomes to classify gene families. The … through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The Impact The class  Dothideomycetes includes …
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JGI announces 2024 New Investigator portfolio
… our tools with a widening circle of researchers. That’s why each year we look for novel research projects — aligned …
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Gut Fungi: Unexpected Source of Novel Chemicals
… natural products . Yet, combing through the genomes of four anaerobic fungal species has revealed, for the first time, that this group is … finnis . In work reported in 2017, the fungal genomes were sequenced by the U.S. Department of Energy (DOE) Joint …
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Ray Turner Completes Last Tour of Lab Duty at JGI
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Learning to Look
… and a unique chronic infection cycle. “We’re not sure why we systematically manage to miss them; maybe it’s due to … first worked on a reference dataset that included genome sequences known to be affiliated with the Inoviridae. “What … to those in typical bacterial or archaeal genomes, the sequence is most likely not an inovirus. But if these nearby …
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