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Q:  Any advice on normalizing metabolomic data from a whole microbial community, without having cell counts or … water availability, temperature variations etc are all more extreme in the field. By having transcriptomics data across … transcriptome analysis and 8 replicates for metabolomics. Why is this? A:  We did a pilot experiment with the JGI to …

… conference, SC’18, led by researchers at Oak Ridge National Laboratory. Dr. Fagnan has been the Distinguished … Hick and D. Jacobsen and D. Skinner and N.J. 2014. Wright Extreme Data Science. Big Data and Extreme-Scale Computing Conference . … UC CORO participant, …

So in 2010, the JGI helped publish the original genome sequence for the soybean, Glycine max. With a full genome sequence, researchers have been able to look into soybean’s … threatens this important crop. Hear more about that work from researchers Gary Stacey (University of Missouri), Peter …

… the development of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the … University of Illinois at Urbana-Champaign and at Argonne National Laboratory. Dr. Kyrpides’ research focus on … et al. (2021) Metagenomic compendium of 189,680 DNA viruses from the human gut microbiome. Nat Microbiol . 6(7):960-970. …

… aims to advance genome science-based scientific research from a broad range of disciplines. Three calls fall under … The ranked proposal list, along with a recommendation from JGI management, is then forwarded to DOE for final …

… underwater volcanoes and hydrothermal vents — where lively microbial communities thrive, and even support entire ecosystems. Hear from researchers Anna-Louise Reysenbach, Emily St. John, … communities, and understanding how they’ve adapted to this extreme environment.   …

… in an unexpected place: hot spring-dwelling bacteria from the phylum C hloroflexota . Research shows that … applications. Summary Hot springs are environments of extremes, where both temperatures and pH levels vary wildly … to spring. These biodiversity hotspots harbor specialized microbial communities living in extreme conditions. The …

By leveraging metagenomics to sample the entirety of a microbial community out in its natural environment, … scientists have shown at least two microorganisms from different phyla are capable of methanogenesis. Using … by collecting samples from Yellowstone’s hot springs, an extreme environment with low genetic diversity that would …