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Seasonal Dynamics of Core Fungi in the Switchgrass Phyllosphere, and Co-Occurrence with Leaf Bacteria
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Metagenomics untangles potential adaptations of Antarctic endolithic bacteria at the fringe of habitability
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Multicellular magnetotactic bacteria are genetically heterogeneous consortia with metabolically differentiated cells
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CRAGE-RB-PI-seq reveals transcriptional dynamics of plant-associated bacteria during root colonization
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Webinar: PhycoCosm Tutorial
… JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics data and comparative analysis tools. Questions and Answers 1.  Q(uestion): Why would your Tree ever differ from NCBI Taxonomy? … to PhycoCosm (if relevant)? A:  For every genome that we sequence, we provide full analysis (assemble, annotate, work …
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New Research Sheds Light on Diversity in the Deep Sea
… vents are too deep in the sea to get any sunlight, and yet they still support a unique array of microorganisms … and repair themselves or eliminate waste. The Impact The bacteria, archaea and other microorganisms of the microbial … shrimp and crabs also live near these vents, feeding on the bacteria and other microorganisms that live there.  …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… The Sequence to Function: Applications and Analysis for the …
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Understanding Wildfire Recovery, Starting in Soil
… at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, … which microbes in the soil persist after a wildfire — and why they thrive — gives forest managers more avenues to … builds on the pyrophilous fungi the JGI has previously sequenced , and provides a powerful snapshot of what soils …
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Gene and transcript abundances of bacterial type III secretion systems from the rumen microbiome are correlated with methane yield in sheep
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Metagenomic Insights into the Uncultured Diversity and Physiology of Microbes in Four Hypersaline Soda Lake Brines
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JGI Portals
… of microbial communities based on their metagenome sequence, in the context of reference isolate genomes … of fungi. Mycocosm enables users to navigate across sequenced fungal genomes, and to conduct comparative and … resource hub that provides access to publicly available sequenced algal genomes and genome annotations generated by …
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Lytic archaeal viruses infect abundant primary producers in Earth’s crust
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