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Water aging and the quality of organic carbon sources drive niche partitioning of the active bathypelagic prokaryotic microbiome
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… symbiotic interactions are difficult to study in the lab. Metagenomics provides new views of these relationships.  … the microorganisms had a close relationship. Then, using metagenomes and metatranscriptomes generated by the U.S. … Frontiers Group, the National Science Foundation (MCB-1244557 to J.A.D.) and the Lawrence Berkeley National …
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Building Sphagnum Genomic Resources
… matter, and researchers estimate that they hold about 25 percent of the world’s soil carbon. In high latitudes, … cycling is a carbon flux regulator since sulfate-reducing microbes prevent methane production by routing the carbon … and the University of Vienna  reported recovering draft metagenome-assembled genomes for seven novel species of …
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Water mass age structures the auxiliary metabolic gene content of free-living and particle-attached deep ocean viral communities
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Genome Sequence of Arenibacter algicola Strain TG409, a Hydrocarbon-Degrading Bacterium Associated with Marine Eukaryotic Phytoplankton
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JGI Earth Month: Wetlands Work in #TenHundredWords
April marks both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both Earth and DNA are close … work on which she is expanding with her study of microbes in California’s manmade water transport canals. …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… for Studies in Bacterial Systematics for the triennium 2017-2020! Established by the University of Queensland in … dark matter”–that uncultured and unknown majority of microbes in, on and around the planet–through techniques including single-cell genomics and metagenomics. They cited her “landmark” 2013 Nature paper , …
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Triggering Morel Fruiting
… assimilated carbon into the soil, reducing the amount of CO2 emissions from decaying leaves and woods into the … China, and a wild black morel strain M. importuna CCBAS932 from the forests of France, were sequenced and annotated … woods above forest soils. This is important to decrease CO2 emissions from decaying leaves and woods into the …
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Genome Sequence of the Mesophilic Thermotogales Bacterium Mesotoga prima MesG1.Ag.4.2 Reveals the Largest Thermotogales Genome To Date
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Doubling Down on Known Protein Families
… big the room is.  A new study  published online Oct. 11, 2023 in  Nature highlights the vast array of functional diversity of microbes through a novel approach to better understand … (IMG/M) database, they successfully crafted the Novel Metagenome Protein Families (NMPF) Catalog.  “We can now …
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Does time matter? Intraspecific diversity of ribosomal RNA genes in lineages of the allopolyploid model grass Brachypodium hybridum with different evolutionary ages
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Taking Stock of the Known and Unknown Microbial Space
Metagenomic datasets could help map out microbial diversity … to the global research community.  Published January 17, 2025 in Science Advances , researchers at the U.S. … art of hands-on microbiology and experimental validation.  Microbes run the world, playing key roles in regulating …
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