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Genomic profiles of four novel cyanobacteria MAGs from Lake Vanda, Antarctica: insights into photosynthesis, cold tolerance, and the circadian clock
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JGI Portals
Our data platforms are a key resource for the broader scientific community and require constant developments to … … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to all … comprehensive access to information regarding genome and metagenome sequencing projects, and their associated metadata, …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … our collaborations and capabilities to enable great science that will help solve energy and environmental … paper in the journal Science. It detailed how they’d used metagenomics — a then-novel approach which allows scientists …
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Nick Everson
Haas School of Business Served as a reviewer for DOE’s Science & Operations Peer Review of the Center for …
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A Plant Root Atlas for Tracking Developmental Trajectories
… of the study’s co-authors is  Benjamin Cole , a research scientist at the U.S. Department of Energy (DOE) Joint … in wild type and cell identity mutants . Dev Cell. 2022 Feb 28. S1534-5807(22)00033-8.doi: 10.1016/j.devcel.2022.01.008 Relevant Links: Single-Cell Data Viewer Tool on …
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Bioinformatic analysis of the distribution of inorganic carbon transporters and prospective targets for bioengineering to increase Ci uptake by cyanobacteria
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Enlarging Windows into Understanding Gene Functions
… encoded in the genome sequence is part of the integrative science mission of the U.S. Department of Energy (DOE) Joint … bind quickly and efficiently in the genome by adding tagged transcription factors to a genomic DNA library. “It’s … Community Science Program proposal call are due in Spring 2022. Byline: Massie S. Ballon       … The U.S. Department …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
Merced students have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, JGI’s … and hard work have carried it through the difficult early stages, so I can begin biological analysis of the data sooner … the event and shared updates. Here are a few of the highlights: Mario Banuelos (2017 graduate intern): Assistant …
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JGI@25: Fueling Investigation into Methane-Making Microbes
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … our collaborations and capabilities to enable great science that will help solve energy and environmental ch … genomes of rumen microbes. In 2018, through a JGI Community Science Program proposal that started six years earlier, …
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Nigel Mouncey
… and carried forward into his roles as a senior research scientist at Roche Vitamins, Inc. in New Jersey and DSM … Society for Industrial Microbiology and Biotechnology in 2022-2023. … Nigel Mouncey is the Secondary Metabolites … species. Scientific Data. 11 Hahnke, R. L. et al. 2022. Expanding the Genomic Encyclopedia of Actinobacteria …
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Rex Malmstrom
Dr. Malmstrom is a Staff Scientist and leader of the Microscale Applications … His group also handles the Stable Isotope Probing (SIP) Metagenomics pipeline  that reveals in situ functional … probing metagenomics. mSystems 8:e01280-22. Volland et al. 2022.   A centimeter-long bacterium with DNA contained in …
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Streamlining Regulon Identification in Bacteria
… transcription factors with their target genes. The Science Regulons are a group of genes that can be turned on … coelicolor . The Impact As an integrative genome science user facility, connecting genes to functions is part … That work published in Nature Communications on June 17 , 2022, was conducted by JGI Director Nigel Mouncey and …
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