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A sorghum pangenome reference improves global crop trait discovery
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CSP New Investigator Call
… initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, and lead PIs cannot have been lead … projects will provide pilot data to assess feasibility of a novel approach or form the foundation for a large-scale … accepted proposals, sequencing, synthesis, metabolomics and analysis will be provided for free to the PI by the …
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Natural Prodcast Episode 9: Roger Linington
… DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I talk to Roger … has gone on, the more we’ve become interested in sort of systems level approaches. So rather than asking one question … of system-wide problems. And it’s not just constitutional analysis as a problem, we need corresponding improvements in …
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Chordate evolution and the three-phylum system
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… A new view into a symbiosis could offer benefits to address climate change: pulling … mycorrhizal symbiosis in other bioenergy grasses, like sorghum and switchgrass. We’re optimizing systems now, so that we can get those working,” Cole said.  … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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Doubling Down on Known Protein Families
… online Oct. 11, 2023 in  Nature highlights the vast array of functional diversity of microbes through a novel approach … Research Center  Alexander Fleming. “This was a massive analysis of 1.3 billion proteins with massively parallel … environment — whether that be soil, animal hosts, marine ecosystems, etc.  “So, they must be doing something interesting …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… Meta-omics datasets show that CRISPR-Cas systems determine mutualism or parasitism between some … The Science Within the archaeal domain, there is a group of tiny hitchhikers. These organisms are abundant and yet … their impact on wider ecosystems, but these symbiotic interactions are difficult to study in the lab. Metagenomics …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a … for a long time about the evolution and natural products systems. This conversation came about because he challenged … symbiont, for example, of an ant. So these are very stable interactions that have been evolving for 300 million years, …
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Microbiome Engineering: Synthetic Biology of Plant-Associated Microbiomes in Sustainable Agriculture
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… The Sequence to Function: Applications and Analysis for the Future (SFA²F) meeting brings together … industry, and government organizations for three days of scientific presentation, interactive panel discussions, …
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Genome Sequences of 42 Bacteria Isolated from Sorghum bicolor Roots
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DNA methylation and gene expression regulation associated with vascularization in Sorghum bicolor
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