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… Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the … Embargo : A period in which data is not publicly available in JGI systems or outside … For sequencing or metabolomics projects: data are subject to a  one-year …

… An article summarizing the field of viral metagenomics, authored by JGI researchers Lee Call,  Stephen … hydrothermal vents – and computationally identifying which sequences represent viruses that were present in the sample. … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …

… mobile genetic elements that were missed within paired metagenome assembled genomes (MAGs), and that dominant … piecing each genome together from large mixtures of genomic sequences. A complementary approach to this is single cell … different recombination profiles. This is akin to the structure of social media networks where one social media …

… As SIP experiments shed more light on microbial communities than ever before — … easier to compare?” said Malmstrom, who worked with JGI Metagenome Program head Emiley Eloe-Fadrosh to host … “ This workshop was really nice because people were given structure, but it was all about sharing ideas. All breakout …

… there a tool in this platform to search fungal genomes in metagenomes? A: Search in metagenomes is available from … and not available for download. 9.  Q: Can I upload my own sequences? A: We can add external annotated fungal genomes, … 10.  Q: Is there any possibility to search for genes/proteins by their commonly used names in publications? e.g. …

… Analysis of haloarchaeal metagenomes broadens understanding of Antarctic … Impact By collecting and sequencing dominant haloarchaeal sequences from six hypersaline lakes, researchers focused on … regional and global biogeography of haloarchaea and the structure and extent of the Antarctic microbial pan-genome. …

… segments used to define a minimum tiling path of sequences in a single contiguous region. The JGI sequenced … The final sugarcane sequence generated is 382 Mb; 25,316 protein-coding gene models were predicted with more than 80 … draft genome sequence of the polyploid sugarcane variety R570. Among the numerous benefits expected from a genome …

… A deep dive into microbial genomics reveals one bacterial species is made … at different depths. In order to determine the genome structure of SAR324 cells and their gene expression, the … sequenced community genomes and expressed gene transcripts (metagenomes, metatranscriptomes), as well as the genomes of …