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… we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great … published a paper in the journal Science. It detailed how they’d used metagenomics — a then-novel approach which … tested in the 2011 paper. In 2015, the study’s dataset became material for a hands-on undergraduate research course …

… the earth, but most species do not grow easily in the lab. To access the genomes of uncultured  microbes , scientists … genomes. These metagenome-assembled genomes (MAGs) that came from shotgun sequencing are tricky because it’s … University) collaborated with the JGI. Working together, they found most bacterial genomes from water and soil …

… microbial partners. The Science To help better understand how ecosystems work and how healthy they are, a recent data set  outlined in  Scientific Data … bioeconomy. Summary The 27 samples studied by researchers came from two environments: natural forests and plantations …

… abide by the concept, “the more the merrier,” with respect to their genomes. In their base state, they are diploids with two genome copies, one from each … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), relied on a …

… Reviews Microbiology column last year — and there’s more to come in 2020. Researchers at the U.S. Department of … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory, are sharing their expertise in … Woyke spread the word among her JGI colleagues, and they agreed, providing three articles for the journal with …

… program is now an author on a Nucleic Acids Research publication. The paper describes the version 6 data updates and feature enhancements to the Genomes OnLine Database (GOLD) administered by the …

… Congratulations to the 2023 Highly Cited Researchers from the JGI recognized … influence in their chosen field or fields through the publication of multiple highly cited papers during the last … to investigate archaeal hitchhikers and found that, while they often act as parasites, others actually help their …

… Genomics Capabilities Webinar inviting researchers to submit white papers to the Community Science Program’s  … gave back in 2016.” Alper’s first approved JGI proposal came through the Functional Genomics (formerly DNA … proposals by a consortium. The consortium looked at how different bioenergy relevant plants can produce …

… plant data portal. On August 6, 2021,  version 12 of Phytozome will be retired, and  version 13 will become the … pages, search, BLAST and BioMart data warehouse interfaces they have come to rely on from Phytozome, with a more … at  https://phytozome-next.jgi.doe.gov/jbrowse/index.html How can I access the genome data that was formerly at …

… bacteria. Until recently, understanding of giant viruses came primarily from sampling an environment, then … to provide a perspective on giant virus diversity, and how sequencing and bioinformatics have sped up the study of … viruses often infect microeukaryote hosts. In doing so, they influence ecosystem-level nutrient cycling and carbon …

… we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great … genome in the early-2000s. She and other researchers came together for what was then called a JGI Jamboree, a … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference …