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Dan Rokhsar
… Dr. Rokhsar joined the JGI in 2000 as the founding Associate Director for Computational Genomics, and led the computational … the Physics Department and in 2002 he became a Professor of Genetics, Genomics and Development after his research … AB in Physics, Princeton University, NJ MS in Theoretical …
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How Filamentous Fungi Sense Food
… Tracing gene regulatory networks in the model fungus  Neurospora crassa . The … Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to reconstruct … hemicellulose. The Impact N. crassa is the model organism for filamentous fungi, all of which contain a wide array of …
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Fungal Friends or Foes in Plant Roots
… Uncovering associations between plant roots and fungi that can help or harm … health and diversity, which can in turn boost yields for both food and for candidate bioenergy feedstock crops. … The sequencing project was funded by the U.S. Department of Energy (DOE) Joint …
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JGI Earth Month: Wetlands Work in #TenHundredWords
… April marks both the 50th celebration of Earth Day on April … living on a changing planet. Mo Kaze is a University of California (UC), Merced graduate student working with  Susannah … the ten hundred most commonly used words in the English language. (Try it yourself  here .) She translated her …
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Statement on the Use of Genomics Data
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is … Genome Project (HGP), and building upon the principles for open access in the field of genomics established in  … are requested to be held until a specified date, or the publication date, whichever comes first. For nearly 40 …
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Help from Citrus’ Bitter, Hardier Cousin
… The chromosome-scale genome sequence of trifoliate orange yields clues to disease-resistance that could prove fruitful for saving Citrus from greening disease. You’ve probably … annotating and analyzing the genome in order to find the genetic traits responsible for  P. trifoliata ’s hardiness, …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… Before 2006, Olpidium was one of the many obscure fungi of … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of … to regain once it is lost. Depending on the exact phylogenetic placement of Olpidium, it may mean that the …
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Genome expansion and lineage-specific genetic innovations in the forest pathogenic fungi Armillaria
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Genetic isolation between two recently diverged populations of a symbiotic fungus
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Chromosome evolution and the genetic basis of agronomically important traits in greater yam
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Extensive Genetic Diversity is Present within North American Switchgrass Germplasm
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Phylogenomics and Comparative Genomics Highlight Specific Genetic Features in Ganoderma Species
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