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Marine Microbe Contains Multitudes
… help regulate the global carbon cycle — fixing, transforming, and respiring carbon. Understanding the metabolisms … In order to determine the genome structure of SAR324 cells and their gene expression, the team then sequenced … metatranscriptomes), as well as the genomes of single cells of the uncultivated SAR324. The constellation …
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Protocols
… protocols provided by JGI and the JGI user community below for DNA preparation tools, high molecular-weight DNA … Tips for High Molecular Weight DNA extraction: …
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Toward a Standards-Compliant Genomic and Metagenomic Publication Record
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A roadmap for equitable reuse of public microbiome data
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Benjamin Cole
… Dr. Cole is interested in studying how plants interact with their environment. Prior to joining the … In addition, Dr. Cole is focusing on how individual plant cells respond to their biotic environment using emerging single-cell characterization technologies (scRNA-seq, …
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Raman-based sorting of microbial cells to link functions to their genes
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Assembly, comparative analysis, and utilization of a single haplotype reference genome for soybean
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A Single Residue Switch Controls Isomer Selectivity in the Myxobacterial Isobonnadiene Synthase
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… For the first time, a team has comprehensively described … species? Or, do they tend to specialize, infecting just a single host? Another wrinkle in the mystery is that viruses … kill outright, replicating so thoroughly that they lyse the cell — a process called lytic infection. But some viruses …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… from the ACTIVE SITES Research Center (ACSI), the Centre for Water and Environmental Research (ZWU) of the University … a diverse range of topics related to structural biology, single cell and systems biology, omics, and big data science, … address some of the most pressing challenges of our time. For more information, please visit  …
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A Natural Mechanism Can Turbocharge Viral Evolution
… step in the deadly dance between a virus and microbial cell is an embrace. For a virus with a “head-tail” morphology, this means using … by the JGI, to uncover these DGRs. DGRs were found in single microbial and viral genomes, as well as genomes … DEB170007), and through a Challenge Grant from the California NanoSystems Institute at the University of California …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… Streamlined genome with precise gene targeting transforms oil-producing alga into a powerful platform for … targeting in the genome in the November 2025 issue of The Plant Cell. Auxenochlorella is an allodiploid hybrid of two … supported, in part, by the NIH T32 Genetics Dissection of Cells and Organisms Grant (1T32GM132022-01) and the Newton …
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