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Doubling Down on Known Protein Families
… wilder than ever. Imagine researchers exploring a dark room with a flashlight, only able to clearly identify what falls … beam — worse, they didn’t even know how big the room is.  A new study  published online Oct. 11, 2023 in  Nature … But what kind of diversity might those ‘unknown unknowns’ hold?  The team started with 8 billion metagenome genes from …
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Complete genome sequence of the thermophilic, hydrogen-oxidizing Bacillus tusciae type strain (T2T) and reclassification in the new genus, Kyrpidia gen. nov. as Kyrpidia tusciae comb. nov. and emendation of the family Alicyclobacillaceae da Costa and
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Nigel Mouncey
… a long-standing interest in microbial genetics that started with his education and carried forward into his roles as a senior research scientist at Roche Vitamins, Inc. in New Jersey and DSM Nutritional Products in Switzerland, and … World Bio Markets Bio-based Business Person of the Year Publications Committee Chair (2016- ), Society for …
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Olpidium, The Key to the Origin of Terrestrial Fungi
Olpidium attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of … to the terrestrial ecosystems exposed fungi to numerous new ecological niches and triggered rapid diversification of …
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Game On: High School Students Drive Everglades Metagenomics Study
The course had a defined set of objectives, and started with an image of a spoonful of dirt with the question: Do you want to find out what is in this … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …
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Cataloging the Microbes that Manage the Health of River Systems
… of water help regulate. However, the microbes also interact with compounds like fertilizers and microplastics that might … 3.8 trillion bases or Terabases of sequencing data, along with geochemical and geospatial measurements collected at … and reuse the data from the GROWdb for comparative analyses with their own data on the KBase platform, without having to …
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Len Pennacchio
… areas. Additional duties of this Deputy include interacting with users seeking to exploit new genomic technologies and providing a vision for future … technical JGI directions for DOE User science. … Complete Publications Genomic Technologies Program Defining the vast …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
Journal publication caps JGI pilot project with fledgling Florida high school scientists. The Florida … “When I originally envisioned the project of the class, I knew that I wanted them to write a final paper that  could be …
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Effects of Polar Light Cycle on Microbial Food Web
Populations of Antarctic lake microbial communities change with the seasons. The Science Light-harvesting bacteria … evolved separately from other similar systems, and offers new clues into a unique environment in the natural world. … The Impact From the polar regions to the deep ocean, cold environments occupy more space on Earth than any other …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… into carbon storage   The Science Boggy peatlands, which hold much of the Earth’s carbon as well as material that can … to energy, are made up heavily of sphagnum mosses.  New research identifies sex chromosomes in the plant and … plants don’t fully decompose in peatlands, and so carbon within their tissues doesn’t return to the atmosphere. Peat …
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Eelgrass Proves to Be Much Younger Than We Thought
… that figure is likely closer to a mere 250,000 years — with many key colonization events in the Atlantic ocean … able to spread quickly and establish itself in a variety of new environments.  This all started roughly 250,000 years … doubling all of its chromosomes.  Over time, the new and old chromosome copies begin to diverge and mutate relative …
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Finding the Fermenters
… to convert food into energy. However, in environments with little or no oxygen, life had found other ways to … metabolism from the literature. They then used the JGI’s GOLD and IMG data portals to get information about the … phenotype and genotype of fermentative prokaryotes on IMG … Publication … Datasets … Datasets … Datasets …
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