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A Community Resource for Secondary Metabolite Researchers
… more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence data from over 1.3 million publicly available … repository of BGC sequences that come pre-annotated using multiple commonly used sequence analysis tools is a means of …
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Analysis of Plant Pan-Genomes and Transcriptomes with GET_HOMOLOGUES-EST, a Clustering Solution for Sequences of the Same Species
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Finding the Fermenters
Harnessing BER-funded data resources, researchers built an … compiled a list of with more than 8,300 organisms from multiple sources, including the U.S. Department of Energy … phenotype and genotype of fermentative prokaryotes on IMG … Publication … Datasets … Datasets … Datasets …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… current PhD student, reached this milestone with a recent publication in Molecular Biology and Evolution . “It’s my … factors and mechanics of gene expression in over 400 fungi species. “Fungi are the masters of adaptation,” Wint … applications, Wint also developed and tested a gene sequence-based predictor of gene expression levels using …
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Micro-Scale Applications Group
… the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also … technology in order to enhance the quality of single-cell genomes and directly link functional information with … access to cutting-edge cell sorting, DNA amplification, and sequence analysis to recover the genomes of uncultivated …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
The Sequence to Function: Applications and Analysis for the Future (SFA²F) meeting brings together established and emerging scientists from … and informal networking events. JGI will present both a genome center talk and a tech talk. Stop by the JGI booth to …
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Evolution and comparative genomics of the most common Trichoderma species
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The Surprising Structure of a Shrub Willow Sex Chromosome
… a plant. The Science Sex in plants can be befuddling. Most species are hermaphrodites, expressing both male and female … first time, the sex chromosomes of shrub willow have been sequenced with sufficient resolution to analyze their … can distinguish males and females even when plants with multi-year generation times are young and haven’t physically …
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IMG ER: a system for microbial genome annotation expert review and curation
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Discovery and annotation of small proteins using genomics, proteomics, and computational approaches
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Improved chromosome-level genome assembly and annotation of the seagrass, Zostera marina (eelgrass)
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IMG/PR: a database of plasmids from genomes and metagenomes with rich annotations and metadata
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