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Nitrogen cycling microbiomes are structured by plant mycorrhizal associations with consequences for nitrogen oxide fluxes in forests
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FICUS-NERSC/KBASE
… The mission of the Joint Genome Institute is to serve the scientific community as … relevant bioenergy and environmental problems.  The mission of the National Energy Research Scientific Computing Center … in rank order by the reviewers. The ranked proposal list, along with a recommendation from management at JGI and the …
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Decoding Yellowstone’s Microbial Mats
… began oxygenating Earth over two billion years ago. A team of researchers set out to Yellowstone National Park to study how cyanobacteria are living, communally, in microbial mats. Along the way, they’ve encountered surprises, adopted new …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… genome discoveries. Unlocking the intricate details of life’s genetic blueprint has long been a significant challenge in genomics. Enter … microbial communities in freshwater environments, the long-term ecological Harvard Forest project, large datasets from … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Community proteogenomics reveals the systemic impact of phosphorus availability on microbial functions in tropical soil
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Silicon-rich soil amendments impact microbial community composition and the composition of arsM bearing microbes
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Genomic insights into redox-driven microbial processes for carbon decomposition in thawing Arctic soils and permafrost.
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Environmental matrix and moisture influence soil microbial phenotypes in a simplified porous media incubation
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The relationship between gene traits and transcription in soil microbial communities varies by environmental stimulus
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Effects of timber harvesting on the genetic potential for carbon and nitrogen cycling in five North American forest ecozones
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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the … knowledge of viral diversity and virus-host interactions in microbial systems. Through a 2021 DOE Early Career Research … B.S. in Microbiology, Université Blaise Pascal, France M.S. in …
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Supercharging SIP in the Fungal Hyphosphere
… The Science Researchers have successfully automated aspects of a commonly-used process for studying microbial communities, with results published in the  … and the fungi. The Impact Stable isotope probing is a long and laborious process — as well as a key way scientists …
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