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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy and … as its name suggests giant miscanthus literally towers over most researchers due to its prodigious capability for … models,  Miscanthus has a large and complex genome whose evolutionary history and perennial lifecycle makes it …
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Genome‐Wide Association Study Identifies Candidate Loci Underlying Agronomic Traits in a Middle American Diversity Panel of Common Bean
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Taking Stock of the Known and Unknown Microbial Space
… in sequencing technologies have led to an abundance of microbial genomes becoming available to the global … “While computationally derived MAGs have been a revolutionary tool for microbiology, it's a call to balance,” … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… in flowering plants, or angiosperms, suggesting they are evolutionarily conserved across plant lineages. They … among early-diverging plant lineages makes it ideal for comparative genomics studies, offering insight into genes critical for …
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Horizontal gene transfer in Histophilus somni and its role in the evolution of pathogenic strain 2336, as determined by comparative genomic analyses
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The Physcomitrella patens chromosome‐scale assembly reveals moss genome structure and evolution
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Genomewide annotation and comparative genomics of cytochrome P450 monooxygenases (P450s) in the polypore species Bjerkandera adusta, Ganoderma sp. and Phlebia brevispora
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Uncovering Novel Genomes from Earth’s Microbiomes
Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … and the  DOE Systems Biology Knowledgebase (KBase) . Metagenomics is the study of the microbial communities in the …
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Comparative Biochemical and Structural Analysis of Novel Cellulose Binding Proteins (Tāpirins) from Extremely Thermophilic Caldicellulosiruptor Species.
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Data Ecosystem
… cohesive data standards, the JGI partners with a number of facilities.  … Through its partnership with NERSC and the … to facilitate these efforts. Particular areas of emphasis will be the development of tools and infrastructure for microbiome data science, and …
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Partnerships Development Team
… works closely with the Berkeley Lab Intellectual Property Office to facilitate these new interactions.  The PDT … sequencing and other resources at the JGI for projects of relevance to Department of Energy missions. Click to … circular economy. Acetogenic  Clostridium is considered the most efficient method of converting abundant low-cost gas …
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A One-Stop Shop for Analyzing Algal Genomes
… algae, but many kinds of algae exist. During the course of evolution, algal organisms sprung up in almost all branches … sequence and understand. A team of researchers led by Algal Genomics Program lead Igor Grigoriev and data scientist Alan … system for microbial and metagenome datasets, MycoCosm for comparative analysis of fungal genomes, and Phytozome for …
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