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JGI@25: Strengthening Soybean
In honor of the JGI's 25th anniversary in 2022, we have revisited a … in the U.S. Not only does it pair with maize, the dominant source of bioethanol, in crop rotation, but soybean … the way, it was just like rediscovering genetics, with the evolution of sequencing technologies and the evolution of …
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A Plant Root Atlas for Tracking Developmental Trajectories
A collaborative team led by Geoffrey Schiebinger at the University of British Columbia, … expression patterns in the  Arabidopsis root, profiling nearly 100,000 single root cells and combining the … with resulting reports and a  perspective article . Publication: Shahan R et al.  A single cell Arabidopsis root …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
Science Altiarchaea are carbon-fixing microbes and targets of multiple viruses in Earth’s deep subsurface. They are … labelling approach. The Impact Altiarchaea are abundant and dominant populations in oxygen-poor environments without … and sequencing of MSI metagenomes within the Census of Deep Life Sequencing call 2018, phase 14 project “Development of …
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Biosynthesis of Cytosporones in Leotiomycetous Filamentous Fungi
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Microbial life under ice: Metagenome diversity and in situ activity of Verrucomicrobia in seasonally ice‐covered Lakes
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Game On: High School Students Drive Everglades Metagenomics Study
… region of the Everglades, the Loxahatchee National Wildlife Preserve. They chose this location because much is … the Florida Everglades. They decided to look at the predominant taxa and the abundance of genes involved in … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …
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Genome-scale phylogenetic analyses confirm Olpidium as the closest living zoosporic fungus to the non-flagellated, terrestrial fungi
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Taking Stock of the Known and Unknown Microbial Space
… the world, playing key roles in regulating global nutrient cycles. The information gained from understanding the … five universally conserved, protein-coding marker genes on nearly 2 million genomes, including isolates, … “While computationally derived MAGs have been a revolutionary tool for microbiology, it's a call to balance,” …
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The ectomycorrhizal basidiomycete Hebeloma cylindrosporum undergoes early waves of transcriptional reprogramming prior to symbiotic structures differentiation
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Genomic Features Predict Bacterial Life History Strategies in Soil, as Identified by Metagenomic Stable Isotope Probing
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… a microbial mat. The Science In microbial mats, communities of microorganisms live among viruses that infect them. But … But some viruses are also able to play a long game. In a lifestyle called lysogeny, they can insinuate themselves … sequencing methods for the first time to comprehensively characterize viral-host interactions. The team discovered …
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Characterisation and comparative analysis of mitochondrial genomes of false, yellow, black and blushing morels provide insights on their structure and evolution
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