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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… kill outright, replicating so thoroughly that they lyse the cell — a process called lytic infection. But some viruses … This work,  recently published in  The ISME Journal , by contrast, relied on methods that eschew culturing, … through the mat, so they’re likely constrained to a local population of host cells. If they were to lyse all those …
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Toward More Efficient Artificial Photosynthesis
… Chloroplast mimic a platform to capture and utilize carbon in a synthetic fixation cycle. The Science Chloroplasts are the factories in plant cells. Using photosynthesis, they take raw materials … to convert them into energy that is then stored. A team led by researchers at the Max Planck Institute (MPI) for …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… was a group lead at Stanford Human Genome Center directed by Richard Myers, and among the Center staff that moved to … large-scale multi-institutional JGI projects and resulting publications that Grimwood contributed to include: A 2021 … also identified a gene related to seed dispersal in wild populations for the first time. A 2020 Nature Genetics paper …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… of knowledge. In a study published November 11, 2022, in Cell Genomics , the team focused on Actinobacteria ( … to define the current shape of the microbial tree of life by filling in genomic information for thousands of … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at … The JGI consists of 225 researchers and support staff in the Integrative Genomics Building in Berkeley, … and metabolomics through its data portals. Supported by the DOE Office of Science's Biological and Environmental …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… right. Welcome back to Natural Prodcast. I did it. I’m keeping to my schedule. This should be coming out on the first … like a lot of people hedge their way into natural products by starting out in synthesis and then discovering more-- … So chemicals are their way of talking. You bring up an excellent point though, and I think this is an area that is a …
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Cultivating Symbiotic Antarctic Microbes
… have adapted to thrive in polar ecosystems. The work by Cavicchioli’s team sheds light on the range of archaeal … growth because they had larger genome sizes and their cells were not observed to associate with host cells. In … the JGI. From these assemblies, complete or near-complete population genomes were recovered—termed …
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Special Initiatives & Programs
… Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for DOE-BER funded awards, including awards funded through  BER Funding Opportunity … negotiation with the JGI.  Investigators with grants funded by DOE-BER requiring support from the JGI may  submit …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… DNA Synthesis Science group held a  JGI Engagement: Accessing Functional Genomics Capabilities Webinar inviting … proposal call is open year-round, but proposals submitted by July 30 will be included in the next review. “So webinars … a FedEx package with the sequenced, quality controlled population representing the full library.   …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… The battle waged below the Earth’s surface is reconstructed by combining a study of microbial communities (metagenomics) … approach. The Impact Altiarchaea are abundant and dominant populations in oxygen-poor environments without oxygen deep … nitrogen, but the viruses that infect Altiarchaea cause the cells to burst. This action triggers subsurface carbon …
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… The JGI was honored to host some of the brightest minds in genetics as part of our  2022 Annual Meeting . The meeting … the exciting progress in gene editing made possible by CRISPR-Cas9; the Weizmann Institute of Science’s Assaf … . Assaf Vardi , Weizmann Institute of Science One cell can change large-scale processes Keynote Talk Title: …
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UC Merced Interns Reflect on Their JGI Summer Projects
… develop presentation skills as well as build their network in the field of genomics and scientific research. The topics … more about their work here in a series of videos produced by JGI Communications & Outreach intern Ashleigh Papp. The … out the short videos highlighting the exciting work done by the 2020 cohort of JGI-UC Merced interns .   by: Ashleigh …
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