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Metagenomes and Metagenome-Assembled Genomes from Substrate-Amended Hot Spring Sediment Incubations from Yellowstone National Park
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple applications … metabolic activities. Found in marine and terrestrial environments, actinobacteria play roles in both the carbon … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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Doubling Down on Known Protein Families
Using a novel computational approach, researchers confirm microbial diversity is wilder than ever. Imagine researchers … unique makeup of microbe players and the functions they perform, artificially replicating a whole community is … these families. They divided the protein families up by environment and found only 7% of protein families were …
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Microbial species and intraspecies units exist and are maintained by ecological cohesiveness coupled to high homologous recombination
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Natural soil microbes alter flowering phenology and the intensity of selection on flowering time in a wild Arabidopsis relative
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Use of Agrobacterium rhizogenes Strain 18r12v and Paromomycin Selection for Transformation of Brachypodium distachyon and Brachypodium sylvaticum
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Rapid selective sweep of pre-existing polymorphisms and slow fixation of new mutations in experimental evolution of Desulfovibrio vulgaris
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Uncovering Novel Genomes from Earth’s Microbiomes
… leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple applications.   … have uncovered genomes for just a small fraction of Earth’s microbial diversity. Because most microbes cannot be … repository of 52,515 microbial draft genomes generated from environmental samples around the world, expanding the known …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth (Toby) Kellogg and … which particularly helps plants thrive in warm, arid environments. Corn and sugarcane are among the major … Kellogg added, and shattering genes may be specific to species or groups of species.  The genome data also revealed …
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JGI@25: From Life at the Extremes to Editing Genomes
… to enable great science that will help solve energy and environmental challenges. Congratulations to Jennifer Doudna of the University of California (UC), Berkeley and Lawrence Berkeley National … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V …
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A single-cell genomics pipeline for environmental microbial eukaryotes
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Near-Complete Genome Sequence of Thalassospira sp. Strain KO164 Isolated from a Lignin-Enriched Marine Sediment Microcosm
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