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PSimScan: Algorithm and Utility for Fast Protein Similarity Search
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JGI on the 2021 Highly Cited Researchers List
… at the JGI! They are among those recognized by Clarivate Analytics for demonstrating “significant influence in their chosen field or fields through the publication of multiple highly cited papers during the last … move from identification of microbial novelty to assigning metabolic and functional capabilities. Videos from symposium …
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Finding the Fermenters
Harnessing BER-funded data resources, researchers built an interactive and comprehensive database of fermentative … other researchers to study the genomes and predict the metabolic abilities of these microbes. The Impact This study … phenotype and genotype of fermentative prokaryotes on IMG … Publication … Datasets … Datasets … Datasets …
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FICUS-NERSC/KBASE
… pioneering functional genomics to solve the most relevant bioenergy and environmental problems.  The mission of … discovery at the DOE Office of Science through high performance computing (HPC) and data analysis.  The DOE Systems … more customized analysis, the JGI also participates in publication of results. … Submission … More on Sequencing …
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Genomic Expansion of Domain Archaea Highlights Roles for Organisms from New Phyla in Anaerobic Carbon Cycling
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Bioinformatic analysis of the distribution of inorganic carbon transporters and prospective targets for bioengineering to increase Ci uptake by cyanobacteria
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Effects of timber harvesting on the genetic potential for carbon and nitrogen cycling in five North American forest ecozones
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Metagenomic reconstruction of nitrogen and carbon cycling pathways in forest soil: Influence of different hardwood tree species
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Soil exchange rates of COS and CO18O differ with the diversity of microbial communities and their carbonic anhydrase enzymes
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Water aging and the quality of organic carbon sources drive niche partitioning of the active bathypelagic prokaryotic microbiome
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Newly identified sex chromosomes in the Sphagnum (peat moss) genome alter carbon sequestration and ecosystem dynamics
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
Team develops a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a … in various shades of white. To researchers searching for sequences of RNA viruses in large data sets, their work … said Eugene Koonin, a senior investigator at the NCBI and one of the senior authors on the paper, of the uncovered …
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