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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… The Sequence to Function: Applications and Analysis for the Future (SFA²F) meeting brings together …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… Streamlined genome with precise gene targeting transforms oil-producing alga into a powerful … relationships than other algae, Auxenochlorella ’s reduced genomic complexity can accelerate the design-build-test … This work was supported by the Department of Energy (DOE) Office of …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… In the summer of 2015, Adam Session was a postdoc working at the DOE Joint Genome … as polyploidy. The multiple copies arise from past genome duplication, which occurs in two basic ways. In …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… For many scientists, the culmination of their work into a written … current PhD student, reached this milestone with a recent publication in Molecular Biology and Evolution . “It’s my … to learning about how to navigate and analyze large genomic datasets during the internship, Wint also began …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information for every family of fungi. In the … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of …
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How Filamentous Fungi Sense Food
… Tracing gene regulatory networks in the model fungus  Neurospora crassa . The Science A team led by researchers at the … We acknowledge the use of deletion strains generated by Grant P01 GM-068087 “Functional Analysis of a Model Filamentous Fungus” and that …
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Help from Citrus’ Bitter, Hardier Cousin
… The chromosome-scale genome sequence of trifoliate orange yields clues to disease-resistance that could prove … The U.S. Department of Energy Joint Genome Institute, a DOE Office of … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple … these datasets will assist researchers in moving toward functional genomics studies to learn more about the inner workings of … The project was funded by the U.S. Department of Energy Joint Genome … DE-AC02-05CH11231 within the framework of the Mycorrhizal Genomics Initiative (CSP # 305), Metatranscriptomics of …
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Mapping the Earth’s Hidden Fungal Kingdom
… Leveraging massive comparative genomics to decode millions of mystery genes and lay a … Earth's fungal kingdom. The manuscript reviews about 200 publications linking evolutionary history and innovations … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Functional Genomics of Novel Secondary Metabolites from Diverse Cyanobacteria Using Untargeted Metabolomics
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Identification of novel biomass‐degrading enzymes from genomic dark matter: Populating genomic sequence space with functional annotation
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Eelgrass Proves to Be Much Younger Than We Thought
… Recent study shows eelgrass has been around about 2.5 million years less than previously … ago, the ancestor to eelgrass underwent a whole genome duplication event, doubling all of its chromosomes.  Over … This study was supported by a PhD scholarship from the China Scholarship …
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