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How Maize Makes An Antibiotic Cocktail
Maize produces a family of compounds that protects it against … zealexins. Even though scientists have identified at least 15 zealexins, they suspect there are even more to find. … which carry out a diverse array of functions, including acting as antibiotics. But zealexins are almost completely …
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2022 Progress Report
Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above … (JGI). Researchers from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative …
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Eelgrass Proves to Be Much Younger Than We Thought
Recent study shows eelgrass has been around about 2.5 million years less than … in various locations.  One group investigated changes in protein sequences, while others analyzed single point …
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2024 Progress Report
The Integrative Genomics Building (IGB) seen above is home to the DOE … processed 13,700 metabolomics samples With our users, 247 publications were published   … Our primary objective is to … the structure and function of a unique cyanobacterial protein and understand its role in photosynthesis. In …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
JGI-led team significantly expands the global diversity of large and … population, the number of viruses in the same drop—the vast majority not harmful to humans could be even larger. … to mine, bin and then filter the data for the major capsid protein (MCP) to identify NCLDV viruses. JGI researchers …
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Biotech Partners Summer Intern Co-Authors NAR Paper
Kaushal Sharma, one of five Antioch High School rising … program is now an author on a Nucleic Acids Research publication. The paper describes the version 6 data updates and feature enhancements to the Genomes OnLine Database (GOLD) administered by the DOE JGI. T.B.K Reddy, …
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SPRUCE-ing Up Science
A former JGI intern is now applying his internship lessons … Lawrence said. While interning, he recalls interacting with renowned scientists who were involved in the … fine tune his approach. “I got a lot of that from Zhong.”   Publication: Carrell AA et al. Habitat-adapted microbial …
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Tanja Woyke Elected to American Academy of Microbiology
Congratulations to the JGI’s Tanja Woyke , who has been elected to the American Academy of Microbiology … viruses (NCLDV) supergroup. As a result, the giant virus protein space grew from 123,000 to over 900,000 proteins, …
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JGI@25: Using Team Science to Build Communities Around Data
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …
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JGI Portals
Our data platforms are a key resource for the broader scientific … Portal provides unified access to all JGI genomic databases and analytical tools for all JGI sequencing projects. … genome and metagenome sequencing projects, and their associated metadata, around the world. … The IMG/M system …
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Training the Next Generation of Talent
New Graduate Internship Program Builds Bridges Between DOE JGI, UC … a DOE Office of Science user facility, Keedrian Olmstead was back on campus at the University of California, Merced to … very familiar with Berkeley Lab; he’d previously served as acting director of the Lab’s Computational Research Division …
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ARHGEF9 disruption in a female patient is associated with X linked mental retardation and sensory hyperarousal
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