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iPHoP: A Matchmaker for Phages and their Hosts
… computation helps fill in what cultivation can’t. The Science At first, viruses are merely toolkits. To do … nutrient cycling, or carbon sequestration. Summary Existing programs use a variety of approaches to match a virus with a … methods. In building this program,  described in Plos Biology , the research team led by scientists at the U.S. …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… in  Nature Microbiology an important addition to the synthetic biologist’s toolkit: a technique for  c hassis (or … single step, directly into the genome. “CRAGE is central to our ability to offer host-engineering for our users,” says … select group of bacterial strains as part of the Community Science Program (CSP)  Functional Genomics proposal call. …
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JGI Advisory Committee
… such as the User Executive Committee, the DNA Synthesis Science User Advisory Committee, the Fungal and Algal …
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Natural Prodcast Episode 23: Aaron Puri
… stable isotopic labeling, an interesting way to explore biosynthetic chemistry. It’s some fun topics, and I think … Natural Prodcast to come. Thanks for listening, and enjoy our talk with Aaron Puri. DAN: Jackie, we have one of your … lot of people would consider more straightforward chemical biology, a lot of which people classify as tool building. So …
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Linking soil biology and chemistry in biological soil crust using isolate exometabolomics
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Natural Prodcast
… chat”-style podcast about natural products and the science and scientists of secondary metabolism. Natural …
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Biology of Fungi and Their Bacterial Endosymbionts
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Environmental distribution and population biology of Candidatus Accumulibacter, a primary agent of biological phosphorus removal
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Analyze Data
… new research questions that span domains. We also work with our partners to build infrastructure in support of new …
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Philympics 2021: Prophage Predictions Perplex Programs
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An Integrated Dataset to Understand Ecosystem Interaction
… between poplar trees and their microbial partners. The Science To help better understand how ecosystems work and … trees. The data set generated is 25 terabytes in size. Resources for genomic sequencing, analysis and characterization … able to conduct a wide variety of analyses that can enhance our understanding of plant-microbe interactions — with …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… when it comes to breaking down tough plant fibers. The Science Walk in a temperate forest filled with Norway spruce trees, and microbial activity teems beneath your feet. Both bacteria and fungi have genes that can break … them. Based on data reported in the April issue of Soil Biology and Biochemistry , the team found that fungi are …
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