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… Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Lab), and the  DOE Systems Biology Knowledgebase (KBase) . Metagenomics is the study of the microbial communities in … Path for Metagenomics Researchers Building upon these resources, KBase, a multi-institutional collaborative knowledge …

… and fungi that can help or harm plant host health. The Science Researchers compared the genomes of fungi that … . The work was partly enabled by a JGI Community Science Program (CSP) proposal led by INRAE’s Francis Martin that … of the key community participants and enabling future metagenomics studies.   …

… at the soil microbes present a year after a wildfire. The Science After a wildfire burns, recovery begins at the … New Mexico State University, the Environmental Molecular Sciences Laboratory and the U.S. Department of Energy (DOE) … for User Science (FICUS) initiative . In this program, researchers leverage the capabilities of more than …

… between poplar trees and their microbial partners. The Science To help better understand how ecosystems work and … managed through human intervention. By leveraging metagenomics, scientists were able to analyze the DNA of … trees. The data set generated is 25 terabytes in size. Resources for genomic sequencing, analysis and characterization …

… may have been important in early Earth conditions. The Science Through a combination of sequencing tools and … and direct microscopy. Through the JGI’s Community Science Program , the team used metagenome assemblies, transcriptomes and single amplified … Energy Joint Genome Institute is supported by the Office of Science of the U.S. Department of Energy under Contract No. …

… this “ data tsunami ,” as Kathy Yelick of the Computing Sciences Area at Lawrence Berkeley National Laboratory … to create pipelines, tools and other standardized data resources that the global research community can access and use … at the JGI and Berkeley Lab were developing specific programs to handle this scale of data. Part 2: Souped Up …

… microbes from complex environmental samples. The Science A team led by researchers at the Max Planck … of the microbial world through bulk community sequencing (metagenomics) and single-cell genomics, the vast majority of … DNA could be sequenced. Their protocol,  detailed in the journal  Microbiome , combines multiple techniques and was …