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JGI User Executive Committee Expands
… of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … in finding ways to boost visibility of the CSP to encourage more plant proposals and provide feedback on … Area. He has partnered with the JGI through several user programs. He’s also bringing his fungal genetics expertise …
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Gut Fungi: Unexpected Source of Novel Chemicals
… expensive feat thought to be too costly for them. The Science Anaerobic fungi, which die in the presence of … can breathe oxygen — just like we do. Oxygen is a rich source of energy, and because anaerobic fungi can’t harness … . Yet, combing through the genomes of four anaerobic fungal species has revealed, for the first time, that this …
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A One-Stop Shop for Analyzing Algal Genomes
… to freely investigate the genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one … They play key roles in global carbon cycling, are sources of natural products, and have potential as biofuel … metagenome datasets, MycoCosm for comparative analysis of fungal genomes, and Phytozome for comparing plant genomes. …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
On July 8, JGI’s DNA Synthesis Science group held a  JGI Engagement: Accessing Functional Genomics Capabilities Webinar inviting researchers to submit … working to address some of the most pressing challenges of our time. For more information, please visit  …
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Institutional User Agreements
… signing official must have the legal authority to commit your institution or organization to the terms and conditions … or Legal Representative. Please check with your unit director or supervisor for the appropriate contact … appointment, a version of the User Agreement between HHMI, your Host Institution and LBNL is required. NOTE:  If a PI …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… genetic toolkit of ancestral and present-day plants The Science In a recent  Nature Genetics paper , researchers … They hypothesized that certain gene families — including fungal genes horizontally transferred — contributed to the … of the  Marchantia pangenome, scientists developed a resource that associates plant’s genetic variants with specific …
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JGI Earth Month: Wetlands Work in #TenHundredWords
… and DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that feels especially relevant to living on … graduate student working with  Susannah Tringe , JGI’s User Programs deputy and head of the Microbial Systems group …
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MycoCosm, the JGI’s Fungal Genome Portal for Comparative Genomic and Multiomics Data Analyses
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Fungal genomes mining to discover novel sterol esterases and lipases as catalysts
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Enlarging Windows into Understanding Gene Functions
… of the alphabet. Yet the specific sequence of these four letters represents an organism’s genetic code, or … encoded in the genome sequence is part of the integrative science mission of the U.S. Department of Energy (DOE) Joint … the JGI’s Community Science Program (CSP) focuses on a fungal comparative ENCODE project known as FUNCODE. “We …
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iPHoP: A Matchmaker for Phages and their Hosts
… computation helps fill in what cultivation can’t. The Science At first, viruses are merely toolkits. To do … nutrient cycling, or carbon sequestration. Summary Existing programs use a variety of approaches to match a virus with a … of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley National …
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10 From JGI on the 2019 Highly Cited Researchers List
Clarivate Analytics, formerly the IP & Science arm of Thomson Reuters, has released their 2019 list … categories Microbial Systems research group lead and User Programs Deputy Susannah Tringe, Cross-Field category … for an uncultivated virus genome, including the source, methods of identification of the virus genome, and …
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