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… separation to library sequencing and assembly. Like others, our turnaround time has been impacted by the pandemic. 3. Q: … We estimate the overall atom enrichment within the bulk community DNA, and that gives us a rough estimate of whether … collection. 4. Q: Are there existing narratives, or plans to develop narratives in KBase for SIP studies? I’d be …

… at Lawrence Berkeley National Laboratory through the Community Science Program . The comparative framework provided by these high … of the  Marchantia pangenome, scientists developed a resource that associates plant’s genetic variants with specific … the European Union’s Horizon 2020 research and innovation program (grant agreement no. 101001675-ORIGINS) and from the …

… Our lab is using mass spectrometry based metabolite … profiling to provide direct biochemical datasets to improve our understanding of microbial metabolism. Of particular … networks of environmental microbes and how they transform their environment. Research Team    …

… on the Institute’s strategic, scientific, technical, informatics, management, and operational objectives. Serving … Science User Advisory Committee, the Fungal and Algal Program User Advisory Committee, the Informatics Advisory Committee, the Plant Program User Advisory Committee, the Prokaryote Program User …

… Yaqi You, Yong Zhang and Zhiping Zhong. (All images courtesy of the researchers) Each year, the JGI searches for novel research projects from PIs who have not led any previously accepted … proposals.  The New Investigator call , part of our  Community Science Program , allows us to work and share our …

… The JGI sequenced the shrub willows through the  Community Science Program , using long-read sequencing to assemble the repetitive areas of the complete … work was supported by the NSF Dimensions of Biodiversity Program (DEB-1542509 to S.D., DEB-1542486 to LBS, and …

… importantly, when faced with a veritable buffet of carbon sources, these fungi detect which complex chains are … (Berkeley Lab). The work was enabled in part through JGI’s Community Science Program through a proposal akin to the … and optimized by Ronan O’Malley, who leads the JGI’s Sequencing Technologies group. DAP-seq allowed the team to …

… Platform Lead where she manages metabolomics production for community sequencing projects and heads R&D efforts to expand the metabolomics … Y, Otani H, de Raad M, Kuftin AN, et al. Mass Spectrometry for Natural Product Discovery. 2020.  Reference Module in …

… But not all scientists have the expertise and resources to do DNA design and synthesis work. This is where … has been instrumental in establishing larger-scale research projects in our group. It’s enabled us to accelerate gene, … through the JGI DNA synthesis Community Science Program (CSP) Functional Genomics, the system allows scientists to …

… sequences for members of the microbial world through bulk community sequencing (metagenomics) and single-cell genomics, the vast … DNA could be sequenced. Their protocol,  detailed in the journal  Microbiome , combines multiple techniques and was …

… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science … been cited more than 5,400 times, including a number of projects that point to the potential of seed oils as … was just like rediscovering genetics, with the evolution of sequencing technologies and the evolution of …

… environmental samples  sequenced by the JGI through the  Community Science Program and was already available on the … Path for Metagenomics Researchers Building upon these resources, KBase, a multi-institutional collaborative knowledge … hope JGI and other institutions continue to do this kind of projects.” The work also used resources of the  National …