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JGIota: Looking Back at Methane-Making Microbes
… 2010, the JGI has supported researchers studying those microbial methane-makers. Eventually, that could help us … Hear more from JGI collaborators Sinead Leahy (New Zealand Agricultural Greenhouse Gas Research Centre) and Bill Kelly …
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Frederik Schulz
… user community and supports various user projects in the Microbial Program. In an LDRD-funded project, Dr. Schulz … Molecular Microbiology, University of Vienna (Austria) PhD Microbial Ecology and Bioinformatics, University of Vienna … Schulz et al. (2020) Giant virus diversity and host interactions through global metagenomics. Nature. 578 …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… molecules exchanged between plants and microbiomes during interactions? Is it reliable performing an untargeted … in natural soil? A:  It depends on the soil. Typically soils that have a high clay content are not well suited for … Q:  Any advice on normalizing metabolomic data from a whole microbial community, without having cell counts or …
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Elviz – exploration of metagenome assemblies with an interactive visualization tool
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Rapid Evolution of Coral Proteins Responsible for Interaction with the Environment
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Plant–microbiome interactions: from community assembly to plant health
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Metabolite release by nitrifiers facilitates metabolic interactions in the ocean
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Hydrophobins from Aspergillus Mediate Fungal Interactions with Microplastics
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Marine Microbe Contains Multitudes
… A deep dive into microbial genomics reveals one bacterial species is made of … Time-series (HOT), they collected samples of the ocean’s microbial communities periodically at different depths. In … software suite, BBTools , and relying on the JGI Integrated Microbial Genomes & Microbiomes (IMG/M) system . By …
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How to Target a Microbial Needle within a Community Haystack
… strides in generating genome sequences for members of the microbial world through bulk community sequencing … of HCR-FISH+FACS for selectively enriching low abundance microbial groups from complex natural communities. This type …
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Long-read metagenomics of soil communities reveals phylum-specific secondary metabolite dynamics
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Methane-derived carbon flows into host–virus networks at different trophic levels in soil
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