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… the DOE Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on the development and … in Hanover, Germany, where he developed novel tools for large-scale in situ gene expression analysis in … novel computational and experimental sequence-based methods for elucidating the gene regulatory landscape of vertebrate …

… purpureus is a short plant with a complex genome . Now, high-quality reference genome sequences of the male and … plants, each representing a single set of chromosomes, are available. The genome assemblies highlight the multiple … advances in sequencing technologies applied to the effort. The Impact Found on all continents, including …

… again how did you pick genomes to be on the genomes portal? For the taxa I work on, there are 7 genomes on NCBI but your … calculate self-alignments, usually in the dropdown of available targets on the synteny page. 7.  Q: What is the … CSP? A: Reminder: two calls for proposals are open right now – large scale CSP and FICUS with March 24 and March 17 …

… leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple applications. … microbial diversity is immense, yet much of it remains unknown. For more than a decade, researchers around the world … Still, the team estimates that genomic information is only available for a fraction of extant actinobacterial …

… of 2020, selected from 118 nominees. The selection process for AAM Fellows is based on their records of scientific … Lab), Woyke has led JGI’s Microbial Genomics Program since 2009 and heads the Single Cells group. She has also served … NCLDVs. “I am thrilled to see Dr. Woyke’s important work acknowledged by this most prestigious honor,” said Axel Visel , …

… metagenomics and metatranscriptomics provide invaluable information on virus diversity and activity in microbial … resources. The main focus of these resource development efforts currently include:  in silico host prediction for uncultivated phages improved annotation and functional …

… nearly 100,000 single root cells and combining the information with previously published datasets. The work was  … for non-model species for which fewer ‘marker’ genes are known that are hallmarks of different cell types.” His … present paper provides a foundational data set that is now available through a new  single-cell data viewer that was …

… joined the JGI in 2000 as the founding Associate Director for Computational Genomics, and led the computational efforts directed towards the sequencing, annotation, and … the Eukaryotic Genome Program (2010-2019), and JGI Chief Informatics Officer (2013-2016). Dr. Rokhsar joined the …

… virus sequences vary widely. In a previous effort, an international consortium recommended specific … Following up on those guidelines, JGI researchers have now developed CheckV (pronounced “Check-Vee”) to help … has already been applied to over 2.4 million viral genomes available in the latest release of IMG/VR . CheckV is freely …

… those big goals with their everyday activities, striving for sustainability in lab spaces as well as offices. These … commitments for the wider Berkeley Lab. “We’re shifting now to our net-zero strategy. And so we’re looking at the … compost, recycling and trash. Last year, in Berkeley, the now IGB-wide ZERO Waste Initiative began its most ambitious …