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JGI@25: Cow Rumen and the Early Days of Metagenomics
… In honor of the JGI's 25th anniversary in 2022, we have … coherent pieces called contigs — into genes and even into genomes — from these environmental samples,” said Matthias … of rumen-digested switchgrass, researchers isolated and sequenced DNA from rumen microbes involved in the digestion …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … that these genome copies that are spread throughout the whole cell are actually contained within a structure that … research focuses on marine mangrove systems, and he was looking for sulfur-oxidizing symbionts in sulfur-rich …
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Dispatches From JGI Interns
… Every summer, the flagship JGI-UC Merced Internship Program invites undergraduate and graduate … to engage in real, impactful research projects with JGI mentors. In this episode, hear two interns from the 2021 …
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Workforce Development & Education Outreach
… Outreach at JGI takes many forms: We offer internship opportunities through working directly with … opportunities and ultimately, an understanding of the JGI’s role in enabling complex biological and environmental … The JGI and UC Merced have had a long-standing internship …
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data … website. Since May 2019, v12 has not had any additional genomes added to it, nor had any feature updates. Phytozome  … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Picking Up Threads of Cotton Genomics
… Analysis reveals cotton genome stability across global lineages . Come harvest time, the cotton fields look like … darwinii are the others. All of these cotton lineages have genomes approximately 2.3 billion bases or Gigabases (Gb) in … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… of Synthetic Biology celebrates research enabled by the JGI DNA Synthesis Science Program. Fashioning DNA outside a cell is key to interrogating what genes … is famous for its work sequencing human and environmental genomes. But we now have these DNA synthesis capabilities …
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JGI Workshops at 33rd Fungal Genetics Conference
… the Edge of Pathogenicity" Workshop Steven Ahrendt presenting  Friday, March 20: JGI-EMSL Workshop: "Toward 10,000 Fungal Genomes and Phenotypes" …
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JGI Announces 2026 New Investigator Portfolio
… A. Estrada-Graf, Nicole M. Fernandez; [Row 2]: Zachary Garvin, Chandan Kumar Gautam, Gareth Gillard, Audrey Goeckner, … Jing Yuan, and Brittany N. Zepernick.    Each year, the JGI solicits novel research projects from PIs who have not … whose proposals were accepted for 2026. With the JGI's resources, these researchers will harness capabilities …
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A chromosome-level genome assembly of the varied leaved jewelflower, Streptanthus diversifolius, reveals a recent whole genome duplication
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JGI Announces 2025 New Investigator Portfolio
… Ian Gilman, Louis Graf, Yuxi Guo, Shaomei He, Vayu Hill- Maini, Forrest Lefler, Pok Man (Bob) Leung and Huang Li; … (All images courtesy of the researchers) Each year, the JGI searches for novel research projects from PIs who have … whose proposals were accepted for 2025. Utilizing the JGI’s resources, these researchers will investigate a …
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JGI announces 2024 New Investigator portfolio
… The JGI is eager to work and share our tools with a widening circle of researchers. That’s why each year we look for … whose proposals were accepted for 2024. Harnessing the JGI’s  resources, these researchers will dive into a range …
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