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Genome biology of the paleotetraploid perennial biomass crop Miscanthus
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Experimentally Validated Reconstruction and Analysis of a Genome-Scale Metabolic Model of an Anaerobic Neocallimastigomycota Fungus
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High intraspecific genome diversity in the model arbuscular mycorrhizal symbiont Rhizophagus irregularis
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Exploiting proteomic data for genome annotation and gene model validation in Aspergillus niger
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Metabolic model predictions enable targeted microbiome manipulation through precision prebiotics.
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Translating macroecological models to predict microbial establishment probability in an agricultural inoculant introduction
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Integrating chromatin conformation information in a self-supervised learning model improves metagenome binning
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FunGAP: Fungal Genome Annotation Pipeline using evidence-based gene model evaluation.
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Microbes and Climate Change: a Research Prospectus for the Future
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FICUS Overview
The Facilities Integrating Collaborations for User Science (FICUS) initiative was established in 2014 to encourage and enable researchers to more easily integrate the expertise and … individual user facilities. A Letter of Intent is required. For accepted proposals, sequencing, synthesis, metabolomics …
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FICUS-NERSC/KBASE
… discovery at the DOE Office of Science through high performance computing (HPC) and data analysis.  The DOE Systems Biology Knowledgebase ( KBase ) integrates systems biology data and tools …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… addition to the synthetic biologist’s toolkit: a technique for  c hassis (or strain)-independent  r ecombinase- a … has already demonstrated CRAGE as a versatile engineering system that allows scientists to conduct genome-wide screens … a fluorescent marker into  E. coli , allowing the team to model the competition dynamics between different synthetic  …
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