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JGI@25: Following Fungi that Pry Apart Plant Polymers
… number of notable achievements that showcase our collaborations and capabilities to enable great science that will help … results showed that these fungi may be able to provide tools beyond biomass breakdown, extending into biochemical … — is  building on this work to explore an enzymatic ‘toolbox’ of biomass-degrading capabilities for anaerobic …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… 5,000 times bigger than most bacteria. To put it into context, it would be like a human encountering another human … of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab) and the Laboratory for … and genomic features of this giant filamentous bacterium, along with its life cycle. For most bacteria, their DNA floats …
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New Research Sheds Light on Diversity in the Deep Sea
… array of microorganisms adapted to living in extreme conditions. At these vents, and underwater volcanoes,  researchers … studied microbial communities across five oceanic regions. In doing so, they found a high degree of variability in …
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Model Fern Reveals Insight into DNA Thievery in Ferns
Open Green Genomes hits milestone with C. richardii The Science Fern genomes are huge, and … of fern biology and, more broadly, land plant evolution. Recent findings in Ceratopteris richardii show a long history of dynamic evolution and rapid changes in both …
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Honey Bee Gut Microbiota Divvy Up Dinner
Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex polysaccharides. Honey bees are invaluable pollinators — cupids of the plant … facilitating the remixing of genes in the next generation of flowering vegetation. In return for their services, …
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A Grass Model to Help Improve Giant Miscanthus
The Science A reference genome sequence and genomic toolkit for the perennial grass Miscanthus sinensis has been … chromosomes of Miscanthus arose by ancient hybridization (polyploidy) and insights into the dynamics of gene … genome for M. sinensis, and the associated genomic tools, allows Miscanthus to both inform and benefit from …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
In microbial mats, communities of microorganisms live among viruses that infect them. But what trends govern those virus-host interactions? Do generalist viruses run rampant, capable of infecting … that they lyse the cell — a process called lytic infection. But some viruses are also able to play a long game. In a …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
In the summer of 2015, Adam Session was a postdoc working at the DOE Joint Genome Institute … with the University of California, Berkeley. Nowadays, Session is an Assistant Professor at Binghamton University in New York. He and Rokhsar have  recently …
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How to Target a Microbial Needle within a Community Haystack
… make-up of specific uncultivated microbes from complex environmental samples. The Science A team led by researchers at … targeted genomic approach would allow researchers to focus on specific microbes within metagenome samples and associate … their sequences with their roles within their environments. Summary The traditional shotgun metagenomics …
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JGI Scientists Pen Genome Watch Articles
… of Science User Facility located at Lawrence Berkeley National Laboratory, are sharing their expertise in environmental genomics by writing for the column Genome Watch in  … sustainable agriculture and was written by JGI computational biologist Rekha Seshadri. Writing the  Nature   Reviews …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both Earth and DNA are close to our JGI …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… proposals have been accepted from 70 full submissions based on 92 letters of intent. Additionally, 40 percent of the proposals were submitted by …
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