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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… analysis leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple … planet’s microbial diversity is immense, yet much of it remains unknown. For more than a decade, researchers around the … diversity. The article adds to the compendium generated as part of Genomic Encyclopedia of Bacteria and …
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Microbiome Data Science Team
Biology is currently experiencing a revolution brought on by rapid developments in … include exploration of the global diversity of alternative genetic codes (Science 2014), unearthing hundreds of … Science 2017, Nature Microbiology 2018), discovery of new genes with important biotechnological applications (e.g., …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… teems beneath your feet. Both bacteria and fungi have genes that can break down plant fibers. But are they both … (transcriptomes) from their soil samples. This gene expression dataset was particularly important for characterizing fungal genes, because, unlike bacteria, they often carry …
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Natural Prodcast Episode 9: Roger Linington
… of Natural Prodcast. This week, Alison and I talk to Roger Linington, from Simon Fraser University in British Columbia, … America brought to the UK? ROGER:  Yeah, it’s difficult to generalize, of course, but I felt overall that the British … my perspective, JGI has a large database of biosynthetic gene clusters and biosynthetic gene cluster fragments, and …
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How Maize Makes An Antibiotic Cocktail
… in every corn variety and protect maize by fending off fungal and microbial infections. Scientists had assumed that … buck. The research team reports that transferring just four genes encoding these enzymes to another plant, such as  … variation in the ability make zealexins, and harnessed gene expression data from these lines to identify genes …
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Fungal community assembly in drought-stressed sorghum shows stochasticity, selection, and universal ecological dynamics
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A fungal transcription factor essential for starch degradation affects integration of carbon and nitrogen metabolism
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Draft Genome Sequence of Microdochium bolleyi, a Dark Septate Fungal Endophyte of Beach Grass
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Insight into trade‐off between wood decay and parasitism from the genome of a fungal forest pathogen
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Reactive iron, not fungal community, drives organic carbon oxidation potential in floodplain soils
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Fungal community response to long‐term soil warming with potential implications for soil carbon dynamics
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
Interns Andrew Lin and mentor Vy Duong, Understanding Key Genes in Photosynthesis Ravikiran Madichetty and mentors TBK … Sandra Hernandez Gonzalez and mentor Hualan Liu, Building Expression Host in Bacilli Class using CRAGE Technology … Kamel, A Comparative Analysis of Metabolic Pathways in Fungal Pathogens Shayna Bennett and mentor Robert Bowers, …
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