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JGI@25: Studying Sorghum’s Survival Skills
… and flood hardiness. Even with little water, full sunlight and hot temperatures, sorghum plants can … to collaborate on research to understand how sorghum fares so well in harsh conditions, and how to engineer … analyze the sweet sorghum RIO reference genome. Compared to shorter, grain-producing varieties previously …
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Emiley Eloe-Fadrosh
… Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in microbial ecology … for stable isotope probing metagenomics. mSystems . 8(4):e0128022. Kelliher JM, et al. 2023. Cohort-based learning for … ZoBell Fellowship, Scripps Institution of Oceanography, 2008 Lewis and Clark Field Scholar, NASA/American Philosophical …
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Specialized proteomic responses and an ancient photoprotection mechanism sustain marine green algal growth during phosphate limitation
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… Newly developed chemiluminescent biosensors shed light on how bacteria function and colonize diverse … Additionally, it opens the door to measuring real-time changes in cyclic di-GMP via live cell imaging. Summary From … that drive oxidative reactions to produce light. Engineered to produce light when bound to a molecule of interest, …
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Green Algae Reveal One mRNA Encodes Many Proteins
… was long held to be monocistronic – that is, a single gene makes messenger RNA, which encodes a single protein. Gene … was long held to be monocistronic – that is, a single gene makes messenger RNA, which encodes a single protein. … and kept seeing what looked like mistakes by the gene prediction algorithms. I decided to dig in a little deeper, …
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First Monoploid Reference Sequence of Sugarcane
… related species – sorghum. The Impact Sugarcane produces 80 percent of the world’s sugar, which is of interest to … methods using molecular biology techniques has been hampered by the crop’s highly polyploid genome, which makes sequencing and assembly of the genome extremely …
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Ian Blaby
… BMC genomics. 20:12. 2019 Anderson et. al., Exploiting algal NADPH oxidase for biophotovoltaic energy. Plant biotechnology journal . 14: 1, 22-28. 2016 Blaby et. al., Genome‐wide analysis on Chlamydomonas … a decade on. Trends in plant science . 19: 10, 672-680. 2014 Blaby, et. al., Systems-level analysis of nitrogen …
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John Vogel
… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior … the development of numerous genomic resources that fostered the widespread adoption of Brachypodium distachyon as an … in collaboration with industrial partners, generated hundreds of transgenic switchgrass lines in an effort to create …
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Sequencing Technologies & Products
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Webinar: MycoCosm Tutorial
… , but being not a fungus and not related to known algal clades, it is not included in either MycoCosm or … in gene naming 11.  Q: In the INFO browser JGI should give credit to the sample provider who are doing the sampling, … process for their genomes. User annotations are highlighted and GeneCatalog track and may be included in GenBank …
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Updating algal evolutionary relationships through plastid genome sequencing: did alveolate plastids emerge through endosymbiosis of an ochrophyte?
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… of microbial hosts that users can select to be engineered. “Piloting access to this emerging technology with JGI … genome-wide screens and explore biosynthetic pathway. Thus far, the JGI has deployed CRAGE to successfully domesticate … and Environmental Microbiology , the researchers engineered root bacteria  Pseudomonas  and Ralstonia with enzymes …
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