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Open Frameworks Training the Next Generation of Scientists
… biology, bioinformatics, and genomics.  The Impact For decades, the Department of Energy (DOE) has invested in … involving academic faculty and researchers at the DOE Joint Genome Institute (JGI), a DOE Office of Science User … and genomics. Fungi can be better understood through reference genomes, but unfortunately there are not many …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… crop. In 2018, the JGI had sequenced and assembled the genomes of two varieties of a close relative and model … the University of Texas at Austin produced a high-quality reference sequence of the complex switchgrass genome. The reference genome built off more than a decade of work; as sequencing technologies advanced, …
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Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing
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Artificial Polyploidy Improves Bacterial Single Cell Genome Recovery
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Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification of Bacteroidetes
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… is immense, yet much of it remains unknown. For more than a decade, researchers around the world have collaborated with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … collapsed, while these issues are not commonly seen with reference isolates. “For secondary metabolite discovery in …
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Plant Metabolic Network 15: A resource of genome‐wide metabolism databases for 126 plants and algae
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Pumping iron: A multi-omics analysis of two extremophilic algae reveals iron economy management
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Characterization of digestate microbial community structure following thermophilic anaerobic digestion with varying levels of green and food wastes
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Low Mutation Rate and Atypical Mutation Spectrum in Prasinoderma coloniale: Insights From an Early Diverging Green Lineage
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From Competition to Cooperation
… lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a broader … lineages. To learn why, researchers analyzed 135 fungal genomes representing major fungal families, including those … genome sequence generated by the JGI more than a decade ago. Having these datasets will assist researchers in …
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Help from Citrus’ Bitter, Hardier Cousin
… The chromosome-scale genome sequence of trifoliate orange yields clues to … that could prove fruitful for saving Citrus from greening disease. You’ve probably never heard of trifoliate … resists a disease ravaging citrus groves: citrus greening. From 2012 to 2016, in Florida alone this disease …
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