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Chapter Five The Sphagnum Genome Project A New Model for Ecological and Evolutionary Genomics
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Alabama Agricultural & Mechanical University Internship Program
… and the Joint Genome Institute. AAMU students spent two months in Berkeley, California honing their scientific skills and collaborating with their … the UC Merced internship program, they left the JGI more confident and ready to tackle real-world scientific issues. …
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Accelerating Metagenomics Discoveries with Deep Learning
On July 6, scientists from Lawrence Berkeley National Laboratory (Berkeley Lab) and other institutions shared their works-in-progress with 86 participants in an online workshop to harness deep learning for metagenomic …
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Natural Prodcast Episode 5: Brad Moore
Prodcast,” a podcast about the science and scientists of secondary metabolism.  Brad Moore, UC San Diego and Scripps … Sequencing Program, and they worked with us to sequence two genomes. Those were of Salinospora tropica and arenicola . … like, you know, at that time, there are only two sequenced genomes of a Streptomyces , or gram-positive high GC …
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Events
New Lineages of Life (NeLLi) … Viral EcoGenomics & Applications (VEGA)  …   The JGI is represented at conferences year round; find out where our researchers will …
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A Redesign for Yeast’s Genome, Chromosome by Chromosome
To engineer yeast to do more, and understand genomes in general, Jef Boeke, Weimin Zhang (NYU Langone Health) and Leslie Mitchell (Neochromosome) have worked … to replace yeast’s native chromosomes with synthetic versions. This project has turned out to be an international …
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Game On: High School Students Drive Everglades Metagenomics Study
… a member of JGI’s Sample Management Group, attended a conference in Florida to discuss a JGI pilot project … able to receive training for the JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) portal for their sample … paper. They wrote, edited, and rewrote a microbiome announcement that has been submitted to the journal  …
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Simon Roux
… research as part of the Metagenome Program. His responsibilities include the development of novel computational … the quality and completeness of metagenome-assembled viral genomes. Nature biotechnology 39, 578-585. Roux et al., … Career LDRD, 2018 Senior Editor: Microbiology Resource Announcements … Education … Selected Publications … Awards …
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Microbial Genomics & Metagenomics (MGM) Workshop
Registration has closed.  The U.S. Department of Energy (DOE) Joint … Genome Institute (JGI) is offering a five-day workshop on Microbial Genomics and Metagenomics. Details: … designed to familiarize users with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows for …
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New Research Sheds Light on Diversity in the Deep Sea
… array of microorganisms adapted to living in extreme conditions. At these vents, and underwater volcanoes,  researchers … datasets are available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) portal. The study,  published …
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Functional genomics gives new insights into the ectomycorrhizal degradation of chitin
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Jane Grimwood Named HudsonAlpha Genomics Chair
Congratulations to Jane Grimwood, who has been appointed the … she has continued to contribute across JGI plant genomes. She has appeared on the annual Highly Cited … the first time. A 2020 Nature Genetics paper describing the genomes of the five major cotton lineages. Grimwood was also …
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