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… collaborated with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Annotation Group. Many of these bacterial and archaeal genome sequences have been generated using techniques that … collapsed, while these issues are not commonly seen with reference isolates. “For secondary metabolite discovery in …

… products field as it relates to structure elucidation and genome mining, and how we might start to better connect … a podcast produced by the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility … want to hear more science from her, check out her podcast, Genome Insider. She talks to lots of great scientists …

… lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a broader … lineages. To learn why, researchers analyzed 135 fungal genomes representing major fungal families, including those for which there were previously no genomes of symbiotic species available: 73 saprotrophs and …

… Commissioned for the JGI’s 25th anniversary, the JGI mural references dozens of iconic JGI contributions to advancing …

… As an Integrative Genome Science User Facility, the JGI plays a leadership role in providing genome science capabilities to support BER's mission of … the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary Metabolites, and DNA …

… For the first time, a team has analyzed in parallel the genomes and transcriptomes of both partners to better … lichens. Studying the symbiosis by investigating a lichen’s genomes and transcriptomes could help inform efforts at … The scientists also sequenced the fungus and photobiont’s genomes and compared them to close relatives who don’t …

… data portal , an interactive collection of sequenced fungal genomes, omics data and comparative analysis tools. … 1.  Q(uestion): Do you accept oomycetes to be proposed for genome sequencing, or only “true fungi”? A(nswer): Our focus … Q1. Are all based on PFAM classification-only and/or other reference DB (citable)? Q2. Is it possible to download these …

… Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for Science … for elucidating the gene regulatory landscape of vertebrate genomes, which led to the discovery of thousands of genetic … in developmental and disease processes in the human genome. In addition to his appointment at the DOE Joint …

… Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who was … Roux leads the Viral Genomics group within the JGI Metagenome Program, and coordinates the development of the virus …

… data portal , an interactive collection of sequenced algal genomes, omics data and comparative analysis tools. … are based upon? A: This is still work in progress as new genomes are being added. We do plan to publish the tree or … populated by algal genomes thus defined. We also have some reference plant genomes to help with comparative studies of …

… researchers focused on the full composition of genes, or pangenome, of the model plant  Marchantia polymorpha. Commonly … . The comparative framework provided by these high quality reference genome sequences could help researchers better … encompass a plant’s genetic diversity beyond a single reference genome, which is key to understanding its full …