Results

Direct Comparisons of Illumina vs. Roche 454 Sequencing Technologies on the Same Microbial Community DNA Sample
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NAP: The Network Analysis Profiler, a web tool for easier topological analysis and comparison of medium-scale biological networks
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FOAM (Functional Ontology Assignments for Metagenomes): a Hidden Markov Model (HMM) database with environmental focus
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… light on microbial communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI researchers and collaborators work to … effort, JGI users and collaborators gathered for a SIP-focused workshop at the JGI in the fall of 2024. “ We wanted …
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Identification of a gene encoding the last step of the L-rhamnose catabolic pathway in Aspergillus niger revealed the inducer of the pathway regulator
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Expression of Aspergillus niger CAZymes is determined by compositional changes in wheat straw generated by hydrothermal or ionic liquid pretreatments
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Mapping N-Linked Glycosylation Sites in the Secretome and Whole Cells of Aspergillus niger Using Hydrazide Chemistry and Mass Spectrometry
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Gene family expansions and transcriptome signatures uncover fungal adaptations to wood decay
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Plasmids captured in C. metallidurans CH34: defining the PromA family of broad-host-range plasmids
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The widespread IS200/605 transposon family encodes diverse programmable RNA-guided endonucleases
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Multisubstrate specificity shaped the complex evolution of the aminotransferase family across the tree of life.
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The JGI announces 2024 awardees for our Community Science Program annual call
… selected for our 2024 Community Science Program Annual Call. “It’s exciting to see the diverse portfolio of successful CSP proposals … forward to seeing their outcomes.” The annual CSP call is focused on large-scale genomic science projects relevant to …
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