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Synthetic Biology Informatics Group
… gRNA-SeqRET , an organism-agnostic CRISPR gRNA design tool BOOST , which provides a suite of tools to automate sequence design for assembly by Gibson, Yeast …
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Metabolomics Technology Group
… lab is using mass spectrometry based metabolite profiling to provide direct biochemical datasets to improve our understanding of microbial metabolism. Of … Research Team    … For further details, please reach out to the Group Lead …
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Microbiome Data Science Team
… discoveries and catalyzing a major transition of biology into data science.  Research in the Kyrpides group focuses on … dark matter as well as the development of novel methods to enable large-scale comparative analysis, mining and … Nature   568(7753):505-510 Amann R. et al (2019) Toward unrestricted use of public genomic data. Science …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… by AI and Machine Learning — JGI researchers and collaborators work to create FAIR datasets to maximize returns on … Especially as machine learning and AI promise new ways of harnessing large datasets, JGI researchers and users are looking for ways of making these experiments more repeatable and …
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User Support
Management Office carries out a number of activities to facilitate world-class science. DOE JGI Project Managers collaborate with users to develop project requirements, define the scope of work … initiated via the Work Initiation Process (WIP) interface. To submit a proposal, users must first log in (Note: new …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
Though visible to the naked eye, microscopy reveals unexpected complexity … characterizing Ca. Thiomargarita magnifica has paved the way for multiple new research questions. Among them, is the … it does chemosynthesis, which is a process analogous to photosynthesis for plants.” Another outstanding question is …
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JGIota: A Surprise for Chloroflexota — The First Flagella!
To understand how organisms adapt to extreme environments, Marike Palmer and Brian Hedlund … Hear how their recent work revealed more about the history of the Chloroflexota phylum and a new way of moving: a tail-like flagella.  …
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Scaling Up Existing Skill Sets
… in fields ranging from plant-microbe interactions to functional genomics. Hear from five of the Summer 2019 … 4th year PhD student in Quantitative and Systems Biology Mentor: Guohong Wu, Plant Comparative Analysis What effect has … plans to pursue a STEM career? Working at JGI was a great way to gain experience in a non-academic research …
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A Mentor’s Perspective on Training the Next Generation
Over the years, hundreds of interns have come to the JGI from all parts of the globe to gain lab experience and contribute to ongoing projects. In one way or another, they’ve all mentioned how invaluable their …
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FICUS Overview
… for User Science (FICUS) initiative was established in 2014 to encourage and enable researchers to more easily integrate the expertise and capabilities of … scientists to conduct fundamental science experiments in ways they couldn’t with projects undertaken separately at …
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Epicuticular wax accumulation and regulation of wax pathway gene expression during bioenergy Sorghum stem development
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JGI Announces 2025 New Investigator Portfolio
Pictured from left: [Top] Bill J. Baker, Jeff Barrick, Ian Gilman, Louis Graf, … biochar on rhizosphere microbiomes, and the metabolic pathways of algae. They will harness JGI capabilities such as …
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