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Thermus sediminis sp. nov., a thiosulfate-oxidizing and arsenate-reducing organism isolated from Little Hot Creek in the Long Valley Caldera, California
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High-Quality Draft Genome Sequence of Desulfovibrio carbinoliphilus FW-101-2B, an Organic Acid-Oxidizing Sulfate-Reducing Bacterium Isolated from Uranium(VI)-Contaminated Groundwater
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2021 Progress Report
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JGI on the 2020 Highly Cited Researchers List
Dan Rokhsar Simon Roux Asaf Salamov Jeremy Schmutz Susannah Tringe Tanja Woyke Below are a few projects each of … Chen ,  Natalia Ivanova ,  Nikos Kyrpides ,  Simon Roux , Susannah Tringe , and Tanja Woyke  were part of a “big data” … candidate bioenergy feedstock crops such as sugarcane and sorghum.     … The U.S. Department of Energy Joint Genome …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
Serve the Changing Planet (download a copy at jointgeno.me/2024StrategicPlan .) This plan aligns the DOE Office of Science user facility with broader national efforts to promote and … support of our goals,” said Mouncey. “Creating transparency about our efforts is critical for enabling complementary and …
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Computationally Classifying Fungal Lifestyles
… includes fungi that obtain nutrients from decaying organic matter (saprobes), and many plant pathogens known to … and feedstocks for biomass and biofuel production. Learning about the ecology and evolution of  Dothideomycetes could … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Phytozome: Tutorial Workshop from 2022 CROPS Conference @HudsonAlpha
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Frederik Schulz
… leading the New Lineages of Life Group. His research is focussed on the discovery of novel bacterial, archaeal and … University of Vienna (Austria) … Krinos et al. 2024. Time-series metagenomics reveals changing protistan … 9 (1), 1-9 Roux et al. (2018) Minimum Information about an Uncultivated Virus Genome (MIUViG). Nature …
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Chloroflexi CL500-11 Populations That Predominate Deep-Lake Hypolimnion Bacterioplankton Rely on Nitrogen-Rich Dissolved Organic Matter Metabolism and C1 Compound Oxidation
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JGI Welcomes New UEC Members
The JGI User Executive Committee (UEC) represents the JGI user … JGI offers, as well as proposal review procedures and the organization of the JGI Annual Meeting. Any investigator who …
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Accelerating Metagenomics Discoveries with Deep Learning
On July 6, scientists from Lawrence Berkeley National … of machine learning, data is passed through algorithms organized into multiple interconnected layers. The … workshop, Volkan Sevim, a computational biologist at the US Department of Energy (DOE) Joint Genome Institute (JGI), …
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A One-Stop Shop for Analyzing Algal Genomes
… can browse the genetic blueprints of these photosynthetic organisms. PhycoCosm is one of the largest data repositories … an interactive browser that allows algal scientists and enthusiasts to look deep into more than 100 algal genomes, … to see their favorite alga’s predicted genes and their organization, and analyze genes in the nucleus and …
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