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Introducing New Members of the JGI User Executive Committee
… new members to the JGI User Executive Committee (UEC) : Roland Hatzenpichler of Montana State University, Teresa Pawlowska … cellular phenotypes and genotypes. Pawlowska, who studies fungal-bacterial symbiotic systems, noted that she would …
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Scaling Up Existing Skill Sets
… of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced students with seven JGI researchers for bioinformatics internship opportunities in … graduate student Mentors: Igor Grigoriev and Asaf Salamov, Fungal and Algal Program What effect has your summer …
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Better Genome Editing for Bioenergy
A team has optimized a crucial part of CRISPR-Cas9 technology to … that lead to increased lipid production. These insights into  Y. lipolytica biology and lipid metabolism furthers … abundant biomass carbohydrates — glucose and xylose — into fatty acids that could be used for renewable fuel. In …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
Understanding the shared genetic toolkit of ancestral and … Commonly known as liverwort, this was done to gain insights into gene families involved in adaptations seen in later … They hypothesized that certain gene families — including fungal genes horizontally transferred — contributed to the …
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JGI on the 2021 Highly Cited Researchers List
Congratulations to the 2021 Highly Cited Researchers at the JGI! They are among those recognized by … hosted two JGI Engagement Webinars promoting the JGI fungal data portal MycoCosm and the algal portal PhycoCosm. …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … impressive amount of biomass which could then be converted into sustainable biofuels . For its importance to the DOE … about a multi-year study his student conducted involving fungal rust pathogen resistance. Just as the common gardens …
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Natural Prodcast Episode 3: The Primer, Part 3
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural … and you can still make more of it, then you start going into human trials or animal trials first, and going through …
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of … that allows algal scientists and enthusiasts to look deep into more than 100 algal genomes, compare them, and … metagenome datasets, MycoCosm for comparative analysis of fungal genomes, and Phytozome for comparing plant genomes. …
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of … that allows algal scientists and enthusiasts to look deep into more than 100 algal genomes, compare them, and … metagenome datasets, MycoCosm for comparative analysis of fungal genomes, and Phytozome for comparing plant genomes. …
Learn more
A Plant Root Atlas for Tracking Developmental Trajectories
A collaborative team led by Geoffrey Schiebinger at the University of … with the JGI’s growing efforts in establishing plant and fungal single-cell and spatial transcriptomic technologies, …
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Tanja Woyke Elected to American Academy of Microbiology
Congratulations to the JGI’s Tanja Woyke , who has been elected to the American Academy of … with Woyke, two JGI users were also elected to the AAM: fungal researcher Jason Stajich of the University of …
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Fungus Fuels Tree Growth
Researchers start pinning down how a fungal symbiont spurs growth of poplar, a potential biofuel … team also observed that the plants instead put more energy into growth, noting they increased expression of genes …
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