Results

A new reference genome for Sorghum bicolor reveals high levels of sequence similarity between sweet and grain genotypes: implications for the genetics of sugar metabolism
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Complete genome sequence of Jiangella gansuensis strain YIM 002T (DSM 44835T), the type species of the genus Jiangella and source of new antibiotic compounds
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Natural Prodcast Episode 16: Marcy Balunas
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Ian Blaby
… metabolism in cyanobacteria Nature Communications 15(1) 3167. 2024 Simirenko et al ., gRNA-SeqRET: a universal tool for … eukaryotes. Frontiers in Bioengineering and Biotechnology. 11. 2023 Liu et. al., Bacterial genome editing by coupling … other stress transcriptomes. The Plant Journal . 84: 5, 974-988. 2015 Zones et. al., High-resolution profiling of a …
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Industry Engagement Program
… industry. When Director Nigel Mouncey joined the JGI in 2017, he brought with him 20 years of industry experience — and … Science Program, the JGI sequenced and characterized 270 genomes of the Clostridium genus for LanzaTech, …
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Doubling Down on Known Protein Families
… how big the room is.  A new study  published online Oct. 11, 2023 in  Nature highlights the vast array of functional … the protein families up by environment and found only 7% of protein families were shared across all eight … Now, that number is closer to 60,000.  “There is still 70–80% of known microbial diversity out there that is not …
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Two new high-resolution crystal structures of carboxysome pentamer proteins reveal high structural conservation of CcmL orthologs among distantly related cyanobacterial species
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John Vogel
… hybridum and its diploid progenitors. Nature Communications 11 (1), 1-16  https://doi.org/10.1038/s41467-020-17302-5 Varoquaux, et. al.N. 2019 Transcriptomic analysis of …
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Fungal & Algal Program
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Nitrosococcus watsonii sp. nov., a new species of marine obligate ammonia‐oxidizing bacteria that is not omnipresent in the world's oceans: calls to validate the names ‘Nitrosococcus halophilus’ and ‘Nitrosomonas mobilis’
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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome … reveals diverse clades of bacteriophages. Cell 185, 4023–4037. Coclet et al., 2023. Virus diversity and activity is … in a high-altitude watershed soil ecosystem. Microbiome 11, 237 Roux et al., 2023. iPHoP: An integrated machine …
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Natural Prodcast Episode 22: Alison Narayan
… PNAS.  2023,  120, e2218248120. doi : 10.1073/pnas.2218248120 …
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